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Report for CCDS8936.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8936.1 Public Homo sapiens 12 STAC3 24 110 108 CCDS HistoryNCBI Gene:246329Re-query CCDS DB by CCDS ID:8936.1Re-query CCDS DB by GeneID:246329See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8936.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332782.7 ENSP00000329200.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332782.7Link to Ensembl Protein Viewer:ENSP00000329200.2Re-query CCDS DB by Nucleotide ID:ENST00000332782Re-query CCDS DB by Protein ID:ENSP00000329200
Original member Current member NCBI NM_145064.3 NP_659501.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145064.3Link to Protein Sequence:NP_659501.1Re-query CCDS DB by Nucleotide ID:NM_145064Re-query CCDS DB by Protein ID:NP_659501Link to BLAST:NP_659501.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659501.1 364 Q96MF2-1 364 100% 0 0

Chromosomal Locations for CCDS 8936.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57243812 57243910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57244088 57244225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57244315 57244366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57244537 57244622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57244916 57244965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57245145 57245211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57246804 57246901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57248126 57248198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57248706 57248803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57249041 57249308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57249571 57249636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGACAGAAAAGGAGGTGCTGGAGTCCCCTAAGCCCTCCTTCCCAGCAGAGACTCGGCAAAGTGGGCTAC
AGCGGCTAAAGCAGTTACTCAGGAAGGGTTCTACAGGGACAAAGGAGATGGAACTTCCCCCAGAGCCCCA
GGCCAATGGGGAGGCAGTGGGAGCTGGGGGTGGGCCCATCTACTACATCTATGAGGAAGAGGAAGAGGAA
GAAGAGGAGGAGGAGGAGCCACCCCCAGAACCTCCTAAGCTGGTCAACGATAAGCCCCACAAATTCAAAG
ATCACTTCTTCAAGAAGCCAAAGTTCTGTGATGTCTGTGCCCGGATGATTGTTCTCAACAACAAGTTTGG
GCTTCGCTGTAAGAACTGCAAAACCAACATCCATGAACACTGTCAGTCCTATGTGGAAATGCAGAGATGC
TTCGGCAAGATCCCACCTGGTTTCCATCGGGCCTATAGTTCCCCACTCTACAGCAACCAGCAGTACGCTT
GTGTCAAAGATCTCTCTGCTGCCAATCGCAATGATCCTGTGTTTGAAACCCTGCGCACTGGGGTGATCAT
GGCAAACAAGGAACGGAAGAAGGGACAGGCAGATAAGAAAAATCCTGTAGCAGCCATGATGGAGGAGGAG
CCAGAGTCGGCCAGACCAGAGGAAGGCAAACCCCAGGATGGAAACCCTGAAGGGGATAAGAAGGCTGAGA
AGAAGACACCTGATGACAAGCACAAGCAGCCTGGCTTCCAGCAGTCTCATTACTTTGTGGCTCTCTATCG
GTTCAAAGCCCTGGAGAAGGACGATCTGGATTTCCCGCCAGGAGAGAAGATCACAGTCATTGATGACTCC
AATGAAGAATGGTGGCGGGGGAAAATCGGGGAGAAGGTCGGATTTTTCCCTCCAAACTTCATCATTCGGG
TCCGGGCTGGAGAACGTGTGCACCGCGTGACGAGATCCTTCGTGGGGAACCGCGAGATAGGGCAGATCAC
TCTCAAGAAGGACCAGATCGTGGTGCAGAAAGGAGACGAAGCGGGCGGCTACGTCAAGGTCTACACCGGC
CGCAAGGTGGGGCTGTTTCCCACCGACTTTCTAGAGGAAATTTAG

Translation (364 aa):
MTEKEVLESPKPSFPAETRQSGLQRLKQLLRKGSTGTKEMELPPEPQANGEAVGAGGGPIYYIYEEEEEE
EEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRC
FGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTGVIMANKERKKGQADKKNPVAAMMEEE
PESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITVIDDS
NEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTG
RKVGLFPTDFLEEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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