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Report for CCDS89310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89310.1 Public Mus musculus 19 Fibp 23 108 98 CCDS HistoryNCBI Gene:58249Re-query CCDS DB by CCDS ID:89310.1Re-query CCDS DB by GeneID:58249See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89310.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000225141.1 ENSMUSP00000153409.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000225141.1Link to Ensembl Protein Viewer:ENSMUSP00000153409.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000225141Re-query CCDS DB by Protein ID:ENSMUSP00000153409
Original member Current member NCBI NM_021438.4 NP_067413.1 Accepted alive Link to Nucleotide Sequence:NM_021438.4Link to Protein Sequence:NP_067413.1Re-query CCDS DB by Nucleotide ID:NM_021438Re-query CCDS DB by Protein ID:NP_067413Link to BLAST:NP_067413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067413.1 357 Q9JI19 357 100% 0 0

Chromosomal Locations for CCDS 89310.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 5460694 5460778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5460961 5461159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5461390 5461516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5462532 5462632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5463171 5463304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5463604 5463712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5463787 5463850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5464129 5464215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5464334 5464431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 5464925 5464994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGACCAGCGAACTAGACATTTTCGTGGGGAACACGACCCTTATAGATGAAGACGTGTATCGCCTCTGGC
TGGATGGTTACTCAGTGAACGATGCAGTGGCTCTGCGAGTACGCTCCGGAATCTTGGAGCAGACGGGAGC
CACCACAGGAGTGCTGCAGAGCGACACCATGGACCACTACCGCACCTTTCACATGCTTGAGCGTCTGCTG
CACGCGCCGCCGAAGCTGCTGCACCAGCTCATCTTCCAGATTCCTCCCTCCCGACAGACACTCCTCATCG
AGAGGTACTACACCTTTGATGAGGCCTTTGTTCGGGAGGTCTTGGGCAAGAAGCTGTCCAAGGGTACCAA
GAAAGACCTGGATGACATCAGCACCAAAACAGGAATTACTCTCAAGAGCTGCCGGAGGCAGTTTGACAAC
TTTAAACGAGTCTTCAAGGTGGTGGAAGAAATGCGGGGCTCCCTGGTGGACAACATCCAGCAGCACTTCC
TCCTCTCTGACCGGTTAGCCAGGGATTACGCAGCCATCGTCTTTTTTGCCAACAACCGCTTTGAAACAGG
AAAGAAAAAGCTGCAGTACCTGAGCTTTGGGGACTTTGCCTTCTGTGCAGAGCTTATGATCCAGAACTGG
ACCCTTGGAGCCGTCGACTCTCAGGTGGACGACATGGATGTGGACTTAGATAAGGAGTTTCTCCAAGACT
TGAAGGAGCTCAAGGTTCTCGTGGCTGACAAGGACCTCCTGGACCTGCATAAGAGCCTGGTGTGCACTGC
CCTCCGGGGAAAGCTGGGTGTCTTCTCTGAGATGGAAACCAACTTCAAGAATCTGTCTCGGGGGCTGGTG
AACGTGGCTGCCAAGCTGACCCACAATAAGGATGTCAGAGACCTATTTGTGGACCTCGTGGAGAAGTTTG
TGGAACCCTGCCGCTCTGACCACTGGCCACTGAGTGATGTGCGGCTCTTCCTCAGCCAGTATTCAGCGTC
AGTCCACTCCCTGGATGGCTTCCGGCACCAGGCACTCTGGGACCGCTACATGGGCACCCTCCGTGGCTGC
CTTCTGCGCCTCTATCATGATTAA

Translation (357 aa):
MTSELDIFVGNTTLIDEDVYRLWLDGYSVNDAVALRVRSGILEQTGATTGVLQSDTMDHYRTFHMLERLL
HAPPKLLHQLIFQIPPSRQTLLIERYYTFDEAFVREVLGKKLSKGTKKDLDDISTKTGITLKSCRRQFDN
FKRVFKVVEEMRGSLVDNIQQHFLLSDRLARDYAAIVFFANNRFETGKKKLQYLSFGDFAFCAELMIQNW
TLGAVDSQVDDMDVDLDKEFLQDLKELKVLVADKDLLDLHKSLVCTALRGKLGVFSEMETNFKNLSRGLV
NVAAKLTHNKDVRDLFVDLVEKFVEPCRSDHWPLSDVRLFLSQYSASVHSLDGFRHQALWDRYMGTLRGC
LLRLYHD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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