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Report for CCDS8929.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8929.1 Public Homo sapiens 12 MYO1A 24 110 108 CCDS HistoryNCBI Gene:4640Re-query CCDS DB by CCDS ID:8929.1Re-query CCDS DB by GeneID:4640See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8929.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300119.8 ENSP00000300119.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300119.8Link to Ensembl Protein Viewer:ENSP00000300119.3Re-query CCDS DB by Nucleotide ID:ENST00000300119Re-query CCDS DB by Protein ID:ENSP00000300119
Original member Current member EBI ENST00000442789.6 ENSP00000393392.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442789.6Link to Ensembl Protein Viewer:ENSP00000393392.2Re-query CCDS DB by Nucleotide ID:ENST00000442789Re-query CCDS DB by Protein ID:ENSP00000393392
Original member Current member NCBI NM_001256041.2 NP_001242970.1 Accepted alive Link to Nucleotide Sequence:NM_001256041.2Link to Protein Sequence:NP_001242970.1Re-query CCDS DB by Nucleotide ID:NM_001256041Re-query CCDS DB by Protein ID:NP_001242970Link to BLAST:NP_001242970.1
Original member Current member NCBI NM_005379.4 NP_005370.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005379.4Link to Protein Sequence:NP_005370.1Re-query CCDS DB by Nucleotide ID:NM_005379Re-query CCDS DB by Protein ID:NP_005370Link to BLAST:NP_005370.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001242970.1 1043 Q9UBC5 1043 100% 0 0
NP_005370.1 1043 Q9UBC5 1043 100% 0 0

Chromosomal Locations for CCDS 8929.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57028755 57028881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57029132 57029259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57029435 57029587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57029740 57029872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57030210 57030316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57031040 57031174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57036307 57036381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57036772 57036840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57036942 57037091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57037548 57037641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57037869 57038069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57038412 57038638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57038809 57039009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57039212 57039274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57041184 57041288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57041432 57041497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57043072 57043158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57043240 57043358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57043856 57044003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57044106 57044209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57046552 57046650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57046863 57046926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57047061 57047107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57047303 57047407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57047627 57047721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57047989 57048104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57048210 57048323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3132 nt):
ATGCCTCTCCTGGAAGGTTCTGTGGGGGTGGAGGATCTTGTCCTCCTGGAACCCTTGGTGGAGGAGTCAC
TGCTCAAGAATCTTCAGCTTCGCTATGAAAACAAGGAGATTTATACCTACATTGGGAATGTGGTGATCTC
AGTGAATCCCTATCAACAGCTTCCCATCTATGGGCCAGAGTTCATTGCCAAATATCAAGACTATACTTTC
TATGAGCTGAAGCCCCATATCTACGCATTGGCAAATGTGGCGTACCAGTCACTGAGGGACAGGGACCGAG
ACCAGTGTATCCTCATCACAGGCGAGAGTGGATCAGGGAAGACTGAGGCCAGCAAGCTGGTGATGTCTTA
TGTGGCTGCCGTCTGTGGGAAAGGAGAGCAGGTGAACTCTGTGAAGGAGCAGCTGCTACAGTCTAACCCA
GTGCTGGAGGCTTTTGGCAATGCCAAGACCATTCGCAACAACAATTCCTCCCGATTTGGAAAATACATGG
ATATTGAATTTGACTTCAAGGGATCCCCCCTCGGTGGTGTCATCACAAACTATCTGCTTGAGAAATCCCG
ATTAGTGAAGCAGCTCAAAGGAGAAAGGAACTTCCACATCTTCTATCAGCTGCTGGCTGGAGCAGATGAA
CAGCTGCTGAAGGCCCTGAAGCTTGAGCGGGATACAACTGGCTATGCCTATCTGAATCATGAAGTATCCA
GAGTGGATGGCATGGACGACGCCTCCAGCTTCAGGGCTGTACAGAGTGCAATGGCAGTGATTGGGTTCTC
GGAGGAGGAGATTCGACAAGTGCTAGAGGTGACATCCATGGTGCTAAAGCTGGGGAACGTGTTGGTGGCT
GATGAGTTCCAGGCCAGTGGGATACCAGCAAGTGGCATCCGTGATGGGAGAGGTGTTCGGGAGATTGGGG
AGATGGTGGGCTTGAATTCAGAAGAAGTAGAGAGAGCTTTGTGCTCGAGGACCATGGAAACAGCCAAGGA
AAAGGTGGTCACTGCACTGAATGTTATGCAGGCTCAGTATGCTCGGGACGCCCTGGCTAAGAACATCTAC
AGCCGCCTCTTTGACTGGATAGTGAATCGAATCAATGAGAGCATCAAGGTGGGCATCGGGGAAAAGAAGA
AGGTAATGGGAGTCCTTGATATCTACGGTTTTGAGATATTAGAGGATAATAGCTTTGAGCAATTTGTGAT
CAACTACTGCAATGAGAAGCTGCAGCAGGTGTTCATAGAGATGACCCTGAAAGAAGAGCAAGAGGAATAT
AAGAGAGAAGGCATACCGTGGACAAAGGTGGACTACTTTGATAATGGCATCATTTGTAAGCTCATTGAGC
ATAATCAGCGAGGTATCCTGGCCATGTTGGATGAGGAGTGCCTGCGGCCTGGGGTGGTCAGTGACTCCAC
TTTCCTAGCAAAGCTGAACCAGCTCTTCTCCAAGCATGGCCACTACGAGAGCAAAGTCACCCAGAATGCC
CAGCGTCAGTATGACCACACCATGGGCCTCAGCTGCTTCCGCATCTGCCACTATGCGGGCAAGGTGACAT
ACAACGTGACCAGCTTTATTGACAAGAATAATGACCTACTCTTCCGAGACCTGTTGCAGGCCATGTGGAA
GGCCCAGCACCCCCTCCTTCGGTCCTTGTTTCCTGAGGGCAATCCTAAGCAGGCATCTCTCAAACGCCCC
CCGACTGCTGGGGCCCAGTTCAAGAGTTCTGTGGCCATCCTCATGAAGAATCTGTATTCCAAGAGCCCCA
ACTACATCAGGTGCATAAAGCCCAATGAGCATCAGCAGCGAGGTCAGTTCTCTTCAGACCTGGTGGCAAC
CCAGGCTCGGTACCTGGGACTGCTGGAGAACGTACGGGTGCGACGGGCAGGCTATGCCCACCGCCAGGGT
TATGGGCCCTTCCTGGAAAGGTACCGATTGCTGAGCCGGAGCACCTGGCCTCACTGGAATGGGGGAGACC
GGGAAGGTGTTGAGAAGGTCCTGGGGGAGCTGAGCATGTCCTCGGGGGAGCTGGCCTTTGGCAAGACAAA
GATCTTCATTAGAAGCCCCAAGACTCTTTTCTACCTCGAAGAACAGAGGCGCCTGAGACTCCAGCAGCTG
GCCACACTCATACAGAAGATTTACCGAGGCTGGCGCTGCCGCACCCACTACCAACTGATGCGAAAGAGTC
AGATCCTCATCTCCTCTTGGTTTCGGGGAAACATGCAAAAGAAATGCTATGGGAAGATAAAGGCATCCGT
GTTATTGATCCAGGCTTTTGTGAGAGGGTGGAAGGCCCGAAAGAATTATCGCAAATATTTCCGGTCAGAG
GCTGCCCTCACCTTGGCAGATTTCATCTACAAGAGCATGGTACAGAAATTCCTACTGGGGCTGAAGAACA
ATTTGCCATCCACAAACGTCTTAGACAAGACATGGCCAGCCGCCCCCTACAAGTGCCTCAGCACAGCAAA
TCAGGAGCTGCAGCAGCTCTTCTACCAGTGGAAGTGCAAGAGGTTCCGGGATCAGCTGTCCCCGAAGCAG
GTAGAGATCCTGAGGGAAAAGCTCTGTGCCAGTGAACTGTTCAAGGGCAAGAAGGCTTCATATCCCCAGA
GTGTCCCCATTCCATTCTGTGGTGACTACATTGGGCTGCAAGGGAACCCCAAGCTGCAGAAGCTGAAAGG
CGGGGAGGAGGGGCCTGTTCTGATGGCAGAGGCCGTGAAGAAGGTCAATCGTGGCAATGGCAAGACTTCT
TCTCGGATTCTCCTCCTGACCAAGGGCCATGTGATTCTCACAGACACCAAGAAGTCCCAGGCCAAAATTG
TCATTGGGCTAGACAATGTGGCTGGGGTGTCAGTCACCAGCCTCAAGGATGGGCTCTTTAGCTTGCATCT
GAGTGAGATGTCATCGGTGGGCTCCAAGGGGGACTTCCTGCTGGTCAGCGAGCATGTGATTGAACTGCTG
ACCAAAATGTACCGGGCTGTGCTGGATGCCACGCAGAGGCAGCTTACAGTCACCGTGACTGAGAAGTTCT
CAGTGAGGTTCAAGGAGAACAGTGTGGCTGTCAAGGTCGTCCAGGGCCCTGCAGGTGGTGACAACAGCAA
GCTACGCTACAAAAAAAAGGGGAGTCATTGCTTGGAGGTGACTGTGCAGTGA

Translation (1043 aa):
MPLLEGSVGVEDLVLLEPLVEESLLKNLQLRYENKEIYTYIGNVVISVNPYQQLPIYGPEFIAKYQDYTF
YELKPHIYALANVAYQSLRDRDRDQCILITGESGSGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQSNP
VLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRLVKQLKGERNFHIFYQLLAGADE
QLLKALKLERDTTGYAYLNHEVSRVDGMDDASSFRAVQSAMAVIGFSEEEIRQVLEVTSMVLKLGNVLVA
DEFQASGIPASGIRDGRGVREIGEMVGLNSEEVERALCSRTMETAKEKVVTALNVMQAQYARDALAKNIY
SRLFDWIVNRINESIKVGIGEKKKVMGVLDIYGFEILEDNSFEQFVINYCNEKLQQVFIEMTLKEEQEEY
KREGIPWTKVDYFDNGIICKLIEHNQRGILAMLDEECLRPGVVSDSTFLAKLNQLFSKHGHYESKVTQNA
QRQYDHTMGLSCFRICHYAGKVTYNVTSFIDKNNDLLFRDLLQAMWKAQHPLLRSLFPEGNPKQASLKRP
PTAGAQFKSSVAILMKNLYSKSPNYIRCIKPNEHQQRGQFSSDLVATQARYLGLLENVRVRRAGYAHRQG
YGPFLERYRLLSRSTWPHWNGGDREGVEKVLGELSMSSGELAFGKTKIFIRSPKTLFYLEEQRRLRLQQL
ATLIQKIYRGWRCRTHYQLMRKSQILISSWFRGNMQKKCYGKIKASVLLIQAFVRGWKARKNYRKYFRSE
AALTLADFIYKSMVQKFLLGLKNNLPSTNVLDKTWPAAPYKCLSTANQELQQLFYQWKCKRFRDQLSPKQ
VEILREKLCASELFKGKKASYPQSVPIPFCGDYIGLQGNPKLQKLKGGEEGPVLMAEAVKKVNRGNGKTS
SRILLLTKGHVILTDTKKSQAKIVIGLDNVAGVSVTSLKDGLFSLHLSEMSSVGSKGDFLLVSEHVIELL
TKMYRAVLDATQRQLTVTVTEKFSVRFKENSVAVKVVQGPAGGDNSKLRYKKKGSHCLEVTVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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