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Report for CCDS89225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89225.1 Public Mus musculus 18 Arap3 23 108 98 CCDS HistoryNCBI Gene:106952Re-query CCDS DB by CCDS ID:89225.1Re-query CCDS DB by GeneID:106952See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89225.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000237272.1 ENSMUSP00000157868.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000237272.1Link to Ensembl Protein Viewer:ENSMUSP00000157868.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000237272Re-query CCDS DB by Protein ID:ENSMUSP00000157868
Original member NCBI NM_001205336.1 NP_001192265.1 Updated not alive Link to Nucleotide Sequence:NM_001205336.1Link to Protein Sequence:NP_001192265.1Re-query CCDS DB by Nucleotide ID:NM_001205336Re-query CCDS DB by Protein ID:NP_001192265
Current member NCBI NM_001205336.2 NP_001192265.1 Accepted alive Link to Nucleotide Sequence:NM_001205336.2Link to Protein Sequence:NP_001192265.1Re-query CCDS DB by Nucleotide ID:NM_001205336Re-query CCDS DB by Protein ID:NP_001192265Link to BLAST:NP_001192265.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001192265.1 1460 Q8R5G7-2 1460 100% 0 0

Chromosomal Locations for CCDS 89225.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 37973172 37973651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37974102 37974140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37974365 37974502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37974618 37974681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37975387 37975422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37975516 37975598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37975823 37975956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37976040 37976168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37978348 37978462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37978545 37978619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37979832 37979900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37980182 37980329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37981309 37981414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37981961 37982173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37984234 37984397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37984589 37984652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37985313 37985532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37987555 37987657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37987754 37987901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37988315 37988428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37989059 37989194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37989363 37989545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37989686 37989771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37989876 37990075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37990512 37990618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37990702 37990886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37990968 37991088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37991328 37991397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37991539 37991730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37996209 37996320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37996419 37996480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 37996586 37996872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4383 nt):
ATGGAGCCAACTCCCAGCCCAGCCCCTGATGCCCAACCCCCCAAGCCTGTGCCTAAGCCCAGGACGGTGT
TTGGGCTCAGCAACCCTGCCACTGCCCAGAGGCCTGGACTGAGCCCAATCTTCTGGGATCCAGAAGTATC
CAGGAACTCAGAGTGTACGCAAAGATCCTCTCCTCTCCTTCCTTCCTCCTCTGAACAGCCTTCAGTCCCG
AATACCATGGAGATGATGCCTAATGCCATCTACTTTGGCCTGGACTTAAGAGGTCGGGCCCAGGCAGCTC
AGGACGTGACTCCAGATAGTTCTCAGGCGACTGTCCCAACCCCTGCCTTCAGGCCCACAACAGGCACAGT
GCACATCATGGATCCTGGTTGCCTGTACTACGGTGTCCAGCCTGTGGGGATCCCAGGAGCCTCTGACAGG
AGAGACGGCAGGGGTGTCTGTCAGGAAAGGGCAGAACACAGACAGGATCTGGAGACACGGGAGGATGCTG
GTTATGCCAGCCTCGAGCTACCTGGAGACTCCATTCTTTCGCTACCCACCCAGGATGCAGAGACCAGTGA
TGACCTCATTTCGCCCTATGCCAGCTTCTCCTCCACAGCAGATCGTCCCGTGCCTCTGCTCAGTGGCTGG
CTGGACAAGCTCTCACCTCAGGGAAACTATGTGTTCCAGAGACGTTTTGTGCAGTTCAATGGAAGGAGTC
TAATGTACTTTGGCAGTGACAAGGACCCCTTCCCCAAAGGTGTGATCCCTCTGACTGCCATCGAGATGAC
CCGAAGCAGCAAGGACAACAAATTCCAGGTCATTACCGGCCAGAGAGTATTTGTGTTCCGCACAGAGAGT
GAGGCTCAGCGTGACCTATGGTGCTCCACGCTGCAATCCTGCCTGAAGGAACAGCGCCTCCTGGGCCACC
CCCGGCCCCCTCACCCACCACGACCCCTCCGCACGGGCACGTTAGAGTTGCGTGGACACAAGGCCAAGGT
GTTTGCTGCCTTGATCCCTGGAGAGCTGGCACTGTACAAGAGTGAGCAGGCCTTCTCACTGGGCATCGGG
ATCTGCTTCATTGAACTGCAAGGCTGCAGTGTCCGGGAGACCAAGAGTCGAAGCTTCGATCTGCTCACAC
CCCATCGCTGCTTCAGCTTCACAGCCGAGTCTGGGGGGGCTCGACAGAGCTGGGCAGCCGCTCTGCAAGA
AGCAGTAACCGAGACACTGTCTGACTACGAGGTGGCTGAGAAGGTCTGGTCCAACCCGGCAAACCGGCAT
TGTGCGGACTGCAGGGCCTCCCGGCCGGATTGGGCTGCCGTCAACCTGGGGGTCGTCATCTGCAAGCAGT
GTGCAGGTCAGCACAGGGCCCTGGGCTCTGGGATCTCCAAGGTGCAGAGCCTGAAGCTGGACACGAGTGT
CTGGAGTAATGAGATAGTGCAGCTGTTCATTGTCCTGGGAAATGATCGTGCCAATTGCTTCTGGGCAGGG
GCACTTCCCCCAGGTGAAGGGCTGCATCCAGATTCAGCCCCTGGCCCTCGAGGAGAGTTCATCTCCCGAA
AGTATAAGCTGGGTCTCTTCCGGAAGCCCCACCCTCGGCATCCAGATCATAGCCAGCTTCTCCAGGCACT
GTGTGCAGCTATGGCAGGACCCAACCTGCTCAAGAACATGGCCCAGCTTCTCTGTGTCGAAACCTCTGAG
GGAGAGGAACCCTTGTCCCCTTCAGCCCTCAATGGCAGCTTGCTTAGCCTTCTACCTTCAGACTCCCCTG
GAGTATACAATGAGGTGGTAGTGCCTGCCACTTACAGAGGTTTCCTGTACTGTGGCTCCATCAGCAACAA
GGCTGGAGCCCCACCCCTTCGCAGGGGCCGGGATGCTCCTCCCCGCTTGTGGTGTGTGCTGGGAGCTGCC
CTGGAAATGTTTGCATCAGAGAGCAGCCCTGAACCCCTCAGCCTTCTCCAGCCCCAGGATATTGTATGTC
TGGGTGTAAGCCCCCCACCTGCTGATCCAGGTGACCTTGACAGGTTCCCCTTTTCCTTTGAACTCATCCT
CACTGGGGGAAGAATCCAGCATTTTGCCACTGATGGAGCAGACAGTCTAGAGGCCTGGATCAGTGCAGTG
GGCAAGTGGTTCTCCCCGCTCAGCTGCCACCAGCTGCTGGGCCCTGGGTTGCTGCGGATGGGTCGCCTGT
GGCTACGGTCCCCCTCCCACGCAGGCCTGGCCCCTGGTCTCTGGCTGTCGGGCTTCGGCCTCCTTCGTGG
TGATCATCTCTTCCTGTGCCCAGCGCCTGGCCCTGGTCCCCCTGCTCCGGAGGACATGGTGCATTTACGA
CGTCTACAGGAGATCAGTGTGGTCTCGGCAGCTGACACTCCAGACAAAAAGGAGCATTTGGTCCTTGTAG
AGACAGGAAGGACCCTGTATTTGCAGGGGGAAGGCAGGCTAGACTTTGCAGCGTGGAACACGGCCATTGG
AGGTGCTGCCGGAGGGGGTGGCACGGGCCTGCAGGAGCAGCAGATGAGCCGGGGAGACATCCCTATCATT
GTGGACGCTTGCATCAGTTTTGTCACGCAGCATGGGCTCCGGCTGGAAGGTGTATATCGGAAAGGAGGCG
CTCGAGCCCGCAGCCTGCGACTCTTGGCTGAGTTTAGGCGGGATGCCCGGTCAGTGAAGCTTAGACCACG
GGAACACTTTGTAGAAGATGTTACTGACACACTCAAACGCTTCTTTCGAGAGCTTGATGACCCCGTGACC
TCTGCTAGGTTGCTGCCTCGATGGAGAGAAGCTGCAGAGCTTTCCCAGAAGAATCAGCGCCTGGAGAAGT
ACAAAGAAGTGATTAGCTGCCTGCCTCGAGTCAACCGCAGAACACTGGCCACCCTCATCGGGCATCTGTA
CCGGGTGCAGAAGTGTGCGTCTCTAAACCAGATGTGCACGCGGAACCTGGCCCTACTGTTTGCACCTAGT
GTGTTCCAGACAGATGGGCGGGGAGAGCATGAGGTTCGGGTACTGCAGGAGCTCATCGATGGCTACATCT
CTGTTTTTGATATTGACTCGGACCAGGCAGCTCAGATTGACTTGGAGGTCAGTCTCATTACCACCTGGAA
GGATGTGCAGTTGTCCCAGGCTGGAGACCTCATCATGGAGGTTTACATAGAACAGCAGCTCCCGGACAAC
TGTGTCACCCTAAAGGTATCCCCAACACTGACTGCTGAGGAGTTGACTAACCAGGTGCTGGAGATGCGAG
GGGCGGCATCGGGGACAGACTTGTGGGTGACATTTGAAATTCTTGAACACGGAGAGCTTGAGAGGCCACT
GCACCCCAAAGAAAAGGTTCTAGAGCAGGCCTTGCAGTGGTGCCAGCTTCCAGAGCCCTGCTCAGCCTCT
CTGCTTCTGAGAAAAGTCTCTATGGCACACGCTGGCTGCCTCTTCACAGGAGTCCGGCGTGAGAGCCCAC
GAGTGGGGCTGCTACGGTGTCGTGAGGAGCCACCTCGATTGCTGGGAAACCGTTTCCAGGAGAGGTTCTT
TTTGGTGCGTGGCCGATGCCTGCTGCTGCTCAAGGAGAAGAAGAGCTCTAAGCCAGAACGGGAGTGGTCT
CTGGAAGGTGCCAAGGTCTACCTGGGAATCCGCAAGAAGTTAAAACCTCCAACACTGTGGGGTTTCACAT
TAATATTGGAAAAGATGCACCTCTGTCTGTCCTGCATGGATGAGGAGGAGATGTGGGACTGGACCACAAG
CATCCTTAAAGCCCAGCATGATGACCAACAGTCCGTGGTTTTACGTCGCCGTTCCTCCTCTGACCTTGCT
CGTCAGAAGTTTGGCACTATGCCCTTGCTGCCCATCCGAGGGGATGACAGTGGAGCCACCCTTCTCTCTG
CCAATCAGACCCTGCGGCGACTACACAACCGGAGGACCTTATCCATGTTCTTTCCAATGAAGTCACCCCA
GGGATCTGTGGAAGAGCAAGATGAGCTGGAGGAGCCTGTGTATGAAGAGCCAGTATATGAGGAGGTCGGG
GCCTTCCCTGAGCTTACCAAGGACACGACCTTCTCTTCCACATGGGAGTGGTCAGCCAAGTCAGATCCAT
CCCTTACCAGCCAGAGGTCCTTTGATCAACCCCCCCTCTCCAAGGCAAGCATGTTGGGCCACGAAGAGAG
GATACCTGACCCTCCTCCGGGCCCCCCTTCAAAAAGCAGTTCTCAGGCACGAGGGTCCCTAGAGGAACAG
CTGCTTCAGGAACTCAACAACCTCATCCTGAGGAAAGGAGAGCCTGCCTCGTGCCCAGAAAGCTCTTCCC
AGCCCACCAGTCCCCAAGCCCCAAGCCCCACCAGCCTTCCAACACCGACCCCCAGCTTACCCACCCAACC
GCCCTGCACTTCCAATCCACCCTCCAGCCAGCCTCTCACATGA

Translation (1460 aa):
MEPTPSPAPDAQPPKPVPKPRTVFGLSNPATAQRPGLSPIFWDPEVSRNSECTQRSSPLLPSSSEQPSVP
NTMEMMPNAIYFGLDLRGRAQAAQDVTPDSSQATVPTPAFRPTTGTVHIMDPGCLYYGVQPVGIPGASDR
RDGRGVCQERAEHRQDLETREDAGYASLELPGDSILSLPTQDAETSDDLISPYASFSSTADRPVPLLSGW
LDKLSPQGNYVFQRRFVQFNGRSLMYFGSDKDPFPKGVIPLTAIEMTRSSKDNKFQVITGQRVFVFRTES
EAQRDLWCSTLQSCLKEQRLLGHPRPPHPPRPLRTGTLELRGHKAKVFAALIPGELALYKSEQAFSLGIG
ICFIELQGCSVRETKSRSFDLLTPHRCFSFTAESGGARQSWAAALQEAVTETLSDYEVAEKVWSNPANRH
CADCRASRPDWAAVNLGVVICKQCAGQHRALGSGISKVQSLKLDTSVWSNEIVQLFIVLGNDRANCFWAG
ALPPGEGLHPDSAPGPRGEFISRKYKLGLFRKPHPRHPDHSQLLQALCAAMAGPNLLKNMAQLLCVETSE
GEEPLSPSALNGSLLSLLPSDSPGVYNEVVVPATYRGFLYCGSISNKAGAPPLRRGRDAPPRLWCVLGAA
LEMFASESSPEPLSLLQPQDIVCLGVSPPPADPGDLDRFPFSFELILTGGRIQHFATDGADSLEAWISAV
GKWFSPLSCHQLLGPGLLRMGRLWLRSPSHAGLAPGLWLSGFGLLRGDHLFLCPAPGPGPPAPEDMVHLR
RLQEISVVSAADTPDKKEHLVLVETGRTLYLQGEGRLDFAAWNTAIGGAAGGGGTGLQEQQMSRGDIPII
VDACISFVTQHGLRLEGVYRKGGARARSLRLLAEFRRDARSVKLRPREHFVEDVTDTLKRFFRELDDPVT
SARLLPRWREAAELSQKNQRLEKYKEVISCLPRVNRRTLATLIGHLYRVQKCASLNQMCTRNLALLFAPS
VFQTDGRGEHEVRVLQELIDGYISVFDIDSDQAAQIDLEVSLITTWKDVQLSQAGDLIMEVYIEQQLPDN
CVTLKVSPTLTAEELTNQVLEMRGAASGTDLWVTFEILEHGELERPLHPKEKVLEQALQWCQLPEPCSAS
LLLRKVSMAHAGCLFTGVRRESPRVGLLRCREEPPRLLGNRFQERFFLVRGRCLLLLKEKKSSKPEREWS
LEGAKVYLGIRKKLKPPTLWGFTLILEKMHLCLSCMDEEEMWDWTTSILKAQHDDQQSVVLRRRSSSDLA
RQKFGTMPLLPIRGDDSGATLLSANQTLRRLHNRRTLSMFFPMKSPQGSVEEQDELEEPVYEEPVYEEVG
AFPELTKDTTFSSTWEWSAKSDPSLTSQRSFDQPPLSKASMLGHEERIPDPPPGPPSKSSSQARGSLEEQ
LLQELNNLILRKGEPASCPESSSQPTSPQAPSPTSLPTPTPSLPTQPPCTSNPPSSQPLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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