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Report for CCDS88049.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88049.1 Public Mus musculus 10 Cdc34 23 108 98 CCDS HistoryNCBI Gene:216150Re-query CCDS DB by CCDS ID:88049.1Re-query CCDS DB by GeneID:216150See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88049.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000219791.1 ENSMUSP00000151763.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219791.1Link to Ensembl Protein Viewer:ENSMUSP00000151763.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219791Re-query CCDS DB by Protein ID:ENSMUSP00000151763
Original member Current member NCBI NM_001359817.1 NP_001346746.1 Accepted alive Link to Nucleotide Sequence:NM_001359817.1Link to Protein Sequence:NP_001346746.1Re-query CCDS DB by Nucleotide ID:NM_001359817Re-query CCDS DB by Protein ID:NP_001346746Link to BLAST:NP_001346746.1

Chromosomal Locations for CCDS 88049.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 79682414 79682590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79684818 79684904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79685005 79685102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 79687849 79688059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCCCGGCCGCTGGTGCCAAGCTCGCAGAAGGCGCTGCTGCTGGAACTGAAGGGGCTGCAGGAGGAGC
CGGTGGAGGGCTTCCGGGTGACGCTGGTGGACGAGGGTGACCTGTACAACTGGGAGGTGGCCATCTTCGG
GCCCCCCAACACCTACTATGAGGGCGGCTACTTCAAGGCTCGCCTCAAGTTCCCCATCGACTACCCGTAT
TCCCCACCAGCCTTCCGGTTCCTCACCAAGATGTGGCACCCAAACATCTATGAGACAGGGGACGTGTGCA
TCTCCATTCTCCATCCCCCAGTTGACGACCCACAGAGTGGGGAGCTGCCCTCAGAGCGGTGGAACCCCAC
ACAGAATGTCAGGAAGCAGGTCCTGGGGACCAAGGTGGACGCGGAGCGCGATGGTGTGAAGGTGCCCACT
ACGCTGGCCGAGTACTGCGTGAAGACCAAGGCGCCGGCGCCCGACGAGGGCTCGGACCTCTTCTACGACG
ACTACTATGAGGACGGCGAAGTGGAGGAGGCCGACAGCTGCTTTGGGGATGAAGAGGATGACTCTGGCAC
CGAAGAGTCCTGA

Translation (190 aa):
MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPY
SPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRKQVLGTKVDAERDGVKVPT
TLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEADSCFGDEEDDSGTEES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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