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Report for CCDS87907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87907.1 Public Mus musculus 1 Fmo1 23 108 98 CCDS HistoryNCBI Gene:14261Re-query CCDS DB by CCDS ID:87907.1Re-query CCDS DB by GeneID:14261See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87907.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111518.2 ENSMUSP00000107143.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111518.2Link to Ensembl Protein Viewer:ENSMUSP00000107143.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111518Re-query CCDS DB by Protein ID:ENSMUSP00000107143
Original member NCBI NM_001330318.1 NP_001317247.1 Updated not alive Link to Nucleotide Sequence:NM_001330318.1Link to Protein Sequence:NP_001317247.1Re-query CCDS DB by Nucleotide ID:NM_001330318Re-query CCDS DB by Protein ID:NP_001317247
Current member NCBI NM_001330318.2 NP_001317247.1 Accepted alive Link to Nucleotide Sequence:NM_001330318.2Link to Protein Sequence:NP_001317247.1Re-query CCDS DB by Nucleotide ID:NM_001330318Re-query CCDS DB by Protein ID:NP_001317247Link to BLAST:NP_001317247.1

Chromosomal Locations for CCDS 87907.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 162841000 162841064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162850062 162850224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162851355 162851543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162859425 162859556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGGTGAAGCGAGTGGCAATTGTGGGAGCTGGGGTCAGCGGCCTGGCCTCCATCAAGTGCTGCCTGGAAG
AGGGGCTGGAGCCCACCTGCTTCGAGAGGAGCAGTGACCTGGGGGGACTTTGGAGATTCACGGAACATGT
TGAAGAAGGGAGAGCCAGTCTTTACAAGTCTGTGGTTTCTAACAGCAGCAGGGAGATGTCGTGTTACCCA
GATTTTCCTTTTCCAGAAGACTATCCAAACTTTGTGCCAAATTCTCTATTCCTGGAATATCTCAAACTCT
ACTCAACCCAGTTCAACCTTCAGAGATGCATTTATTTCAATACCAAAGTGTGCAGTATAACAAAACGCCC
GGATTTTGCTGTCTCTGGACAGTGGGAAGTGGTCACTGTCACAAACGGGAAGCAAAACTCAGCCATCTTT
GATGCTGTCATGGTCTGCACTGGTTTTCTAACTAACCCACATCTGCCCCTGGATTCCTTCCCAGTCTGCT
TTACGGGAACCTTTATCACCGTCGTTCCCCAGCTGATGAGTTCTGAATTCGGCAGTTGA

Translation (182 aa):
MVKRVAIVGAGVSGLASIKCCLEEGLEPTCFERSSDLGGLWRFTEHVEEGRASLYKSVVSNSSREMSCYP
DFPFPEDYPNFVPNSLFLEYLKLYSTQFNLQRCIYFNTKVCSITKRPDFAVSGQWEVVTVTNGKQNSAIF
DAVMVCTGFLTNPHLPLDSFPVCFTGTFITVVPQLMSSEFGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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