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Report for CCDS87841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87841.1 Public Mus musculus 1 Crygf 23 108 98 CCDS HistoryNCBI Gene:12969Re-query CCDS DB by CCDS ID:87841.1Re-query CCDS DB by GeneID:12969See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87841.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114027.2 ENSMUSP00000109661.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114027.2Link to Ensembl Protein Viewer:ENSMUSP00000109661.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114027Re-query CCDS DB by Protein ID:ENSMUSP00000109661
Original member Current member NCBI NM_001360779.1 NP_001347708.1 Accepted alive Link to Nucleotide Sequence:NM_001360779.1Link to Protein Sequence:NP_001347708.1Re-query CCDS DB by Nucleotide ID:NM_001360779Re-query CCDS DB by Protein ID:NP_001347708Link to BLAST:NP_001347708.1

Chromosomal Locations for CCDS 87841.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65926558 65926566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65926648 65926890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65927985 65928077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (345 nt):
ATGGGGAAGATCACCTTCTATGAGGACCGCAGCTTCCAGGGCCGCCACTATGAGTGCAGCACCGACCACT
CCAACCTGCAGCCCTACTTCAGCCGCTGCAACTCTGTGCGAGTGGACAGTGGCTGCTGGATGCTCTATGA
GCAGCCCAACTTCGCAGGCTGCCAGTACTTCCTGCGTCGCGGGGACTACCCTGACTACCAGCAGTGGATG
GGTTTCAGTGACTCTGTCCGCTCCTGCCACCTCATCCCCCACGATCAGGATCTACGAGCGAGAGGACTAC
AGAGGCCAGATGGTGGAGATCACAGACGACTGCTCCCACCTGCAGGACCGCTTCCACTTCAGTGA

Translation (114 aa):
MGKITFYEDRSFQGRHYECSTDHSNLQPYFSRCNSVRVDSGCWMLYEQPNFAGCQYFLRRGDYPDYQQWM
GFSDSVRSCHLIPHDQDLRARGLQRPDGGDHRRLLPPAGPLPLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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