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Report for CCDS87644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87644.1 Public Homo sapiens 9 CDKN2A 24 110 108 CCDS HistoryNCBI Gene:1029Re-query CCDS DB by CCDS ID:87644.1Re-query CCDS DB by GeneID:1029See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000494262.5 ENSP00000464952.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000494262.5Link to Ensembl Protein Viewer:ENSP00000464952.1Re-query CCDS DB by Nucleotide ID:ENST00000494262Re-query CCDS DB by Protein ID:ENSP00000464952
Original member Current member EBI ENST00000578845.2 ENSP00000467390.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000578845.2Link to Ensembl Protein Viewer:ENSP00000467390.1Re-query CCDS DB by Nucleotide ID:ENST00000578845Re-query CCDS DB by Protein ID:ENSP00000467390
Original member Current member EBI ENST00000498628.6 ENSP00000467857.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000498628.6Link to Ensembl Protein Viewer:ENSP00000467857.1Re-query CCDS DB by Nucleotide ID:ENST00000498628Re-query CCDS DB by Protein ID:ENSP00000467857
Original member Current member NCBI NM_001363763.2 NP_001350692.1 Accepted alive Link to Nucleotide Sequence:NM_001363763.2Link to Protein Sequence:NP_001350692.1Re-query CCDS DB by Nucleotide ID:NM_001363763Re-query CCDS DB by Protein ID:NP_001350692Link to BLAST:NP_001350692.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350692.1 105 P42771-2 105 100% 0 0

Chromosomal Locations for CCDS 87644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21968229 21968242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21970902 21971205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGATGATGGGCAGCGCCCGAGTGGCGGAGCTGCTGCTGCTCCACGGCGCGGAGCCCAACTGCGCCGACC
CCGCCACTCTCACCCGACCCGTGCACGACGCTGCCCGGGAGGGCTTCCTGGACACGCTGGTGGTGCTGCA
CCGGGCCGGGGCGCGGCTGGACGTGCGCGATGCCTGGGGCCGTCTGCCCGTGGACCTGGCTGAGGAGCTG
GGCCATCGCGATGTCGCACGGTACCTGCGCGCGGCTGCGGGGGGCACCAGAGGCAGTAACCATGCCCGCA
TAGATGCCGCGGAAGGTCCCTCAGACATCCCCGATTGA

Translation (105 aa):
MMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL
GHRDVARYLRAAAGGTRGSNHARIDAAEGPSDIPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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