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Report for CCDS87505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87505.1 Public Homo sapiens 7 COBL 24 110 108 CCDS HistoryNCBI Gene:23242Re-query CCDS DB by CCDS ID:87505.1Re-query CCDS DB by GeneID:23242See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395540.6 ENSP00000378910.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395540.6Link to Ensembl Protein Viewer:ENSP00000378910.2Re-query CCDS DB by Nucleotide ID:ENST00000395540Re-query CCDS DB by Protein ID:ENSP00000378910
Original member Current member NCBI NM_001346444.2 NP_001333373.1 Accepted alive Link to Nucleotide Sequence:NM_001346444.2Link to Protein Sequence:NP_001333373.1Re-query CCDS DB by Nucleotide ID:NM_001346444Re-query CCDS DB by Protein ID:NP_001333373Link to BLAST:NP_001333373.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333373.1 469 O75128-4 469 100% 0 0

Chromosomal Locations for CCDS 87505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 51065136 51065449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51085166 51085304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51136158 51136331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51184102 51184199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51190850 51191078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51193379 51193589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51219741 51219944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51316593 51316633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGGACGCGCCGCGCGCCTCGGCGGCCAAGCCCCCGACCGGGAGGAAGATGAAGGCTCGTGCTCCCCCAC
CTCCTGGAAAGGCTGCCACTCTGCATGTGCACAGTGACCAGAAGCCCCCCCACGATGGGGCCCTCGGGTC
GCAGCAGAACTTGGTTCGCATGAAGGAGGCGCTGAGGGCCAGCACCATGGACGTCACCGTGGTCCTGCCT
AGTGGGCTGGAGAAGAGGAGCGTGCTCAATGGGAGCCATGCGATGATGGACCTACTGGTTGAACTTTGCC
TTCAGAACCACCTGAATCCATCCCACCATGCCCTTGAAATTCGGTCTTCAGAAACCCAACAACCTTTGAG
TTTTAAGCCAAATACTTTGATTGGGACCCTGAATGTGCATACTGTGTTTCTGAAAGAAAAAGTTCCTGAA
GAGAAGGTTAAGCCTGGTCCCCCTAAGGTGCCTGAGAAATCTGTGCGTTTGGTCGTGAATTACCTGCGGA
CACAAAAAGCTGTTGTGCGTGTGAGCCCTGAGGTTCCTCTCCAGAATATTCTCCCAGTCATTTGTGCAAA
GTGTGAGGTCAGCCCAGAGCACGTGGTTCTCCTCAGGGACAACATTGCCGGAGAGGAGCTGGAGCTGTCC
AAGTCCCTGAACGAGCTCGGGATAAAGGAGCTCTACGCGTGGGACAACAGAAGAGAAACCTTTAGGAAAT
CATCACTTGGCAATGATGAGACAGATAAAGAGAAGAAAAAATTTCTGGGATTTTTCAAAGTTAATAAAAG
AAGCAATAGTAAGGGCTGTTTAACGACCCCCAACTCCCCATCCATGCACTCACGTTCTCTTACGCTGGGT
CCATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCGTGAAGTCGGAGATGAAGAAGCGCCGAGCCCCTC
CTCCTCCAGGTTCAGGGCCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCTCTTGGGTCACAGATTGA
TTTACAGAAGAAGAAGCGGCGAGCGCCAGCTCCCCCTCCACCACAGCCACCACCACCGAGTCCCCTGATC
CCCAACCGCACTGAGGATAAGGAGGAGAACAGGAAGAGCACGATGGTTTATGGAGCAGCTGAAGCTGTGA
TAAGACTTCTGAGCTTGCTTCTGAATACCACAGCCCCGGGCACAGCAAAGCCAAGAACCCTGTGGATGAG
TGAGGGCCGCAGTTCTCTACACAATCCTGAAATCAAGTGTTCCTGTTTCTCTTCCTCCTCCCCATTTCCC
CAGTCACTGCTCAGCCTTCTCTTGGGTCTTTCAAGCATTTGTGAATGCATGTGCACACTTAGACACACAC
ACGCACACACACACAACCCATCTTGTGTCTTACCTACCTCTGAAATATTGGCATTTGGGAGACAATCCCT
AATCAGCTAA

Translation (469 aa):
MDAPRASAAKPPTGRKMKARAPPPPGKAATLHVHSDQKPPHDGALGSQQNLVRMKEALRASTMDVTVVLP
SGLEKRSVLNGSHAMMDLLVELCLQNHLNPSHHALEIRSSETQQPLSFKPNTLIGTLNVHTVFLKEKVPE
EKVKPGPPKVPEKSVRLVVNYLRTQKAVVRVSPEVPLQNILPVICAKCEVSPEHVVLLRDNIAGEELELS
KSLNELGIKELYAWDNRRETFRKSSLGNDETDKEKKKFLGFFKVNKRSNSKGCLTTPNSPSMHSRSLTLG
PSLSLGSISGVSVKSEMKKRRAPPPPGSGPPVQDKASEKVSLGSQIDLQKKKRRAPAPPPPQPPPPSPLI
PNRTEDKEENRKSTMVYGAAEAVIRLLSLLLNTTAPGTAKPRTLWMSEGRSSLHNPEIKCSCFSSSSPFP
QSLLSLLLGLSSICECMCTLRHTHAHTHNPSCVLPTSEILAFGRQSLIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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