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Report for CCDS87322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87322.1 Public Homo sapiens 5 IL4 24 110 108 CCDS HistoryNCBI Gene:3565Re-query CCDS DB by CCDS ID:87322.1Re-query CCDS DB by GeneID:3565See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 87322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622422.1 ENSP00000480581.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622422.1Link to Ensembl Protein Viewer:ENSP00000480581.1Re-query CCDS DB by Nucleotide ID:ENST00000622422Re-query CCDS DB by Protein ID:ENSP00000480581
Original member Current member NCBI NM_001354990.2 NP_001341919.1 Accepted alive Link to Nucleotide Sequence:NM_001354990.2Link to Protein Sequence:NP_001341919.1Re-query CCDS DB by Nucleotide ID:NM_001354990Re-query CCDS DB by Protein ID:NP_001341919Link to BLAST:NP_001341919.1

Chromosomal Locations for CCDS 87322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132674051 132674185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132674459 132674506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132677781 132677881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132679714 132679840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (411 nt):
ATGGGTCTCACCTCCCAACTGCTTCCCCCTCTGTTCTTCCTGCTAGCATGTGCCGGCAACTTTGTCCACG
GACACAAGTGCGATATCACCTTACAGGAGATCATCAAAACTTTGAACAGCCTCACAGAGCAGAAGACTCT
GTGCACCGAGTTGACCGTAACAGACATCTTTGCTGCCTCCAAGCAGCATGCATGTCTGCCCACCTCCAGA
CACACAGGCACCATCTGCCGCCCCCCATCAGCCCGTGTCCCTTCCACCTCGACTCGCCTACAAAGCCCAG
AGAGAACACAACTGAGAAGGAAACCTTCTGCAGGGCTGCGACTGTGCTCCGGCAGTTCTACAGCCACCAT
GAGAAGGACACTCGCTGCCTGGGTGCGACTGCACAGCAGTTCCACAGGCACAAGCAGCTGA

Translation (136 aa):
MGLTSQLLPPLFFLLACAGNFVHGHKCDITLQEIIKTLNSLTEQKTLCTELTVTDIFAASKQHACLPTSR
HTGTICRPPSARVPSTSTRLQSPERTQLRRKPSAGLRLCSGSSTATMRRTLAAWVRLHSSSTGTSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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