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Report for CCDS87320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87320.1 Public Homo sapiens 5 FNIP1 24 110 108 CCDS HistoryNCBI Gene:96459Re-query CCDS DB by CCDS ID:87320.1Re-query CCDS DB by GeneID:96459See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307954.12 ENSP00000310453.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307954.12Link to Ensembl Protein Viewer:ENSP00000310453.8Re-query CCDS DB by Nucleotide ID:ENST00000307954Re-query CCDS DB by Protein ID:ENSP00000310453
Original member Current member NCBI NM_001346114.2 NP_001333043.1 Accepted alive Link to Nucleotide Sequence:NM_001346114.2Link to Protein Sequence:NP_001333043.1Re-query CCDS DB by Nucleotide ID:NM_001346114Re-query CCDS DB by Protein ID:NP_001333043Link to BLAST:NP_001333043.1

Chromosomal Locations for CCDS 87320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 131644685 131644763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131647090 131647205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131651802 131651999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131670463 131670631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131671505 131672924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131677703 131677872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131679029 131679175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131698917 131699002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131704065 131704266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131706411 131706546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131709201 131709272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131710578 131710661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131716565 131716656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131718986 131719060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131719317 131719417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131744564 131744690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 131796830 131796921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3366 nt):
ATGGCCCCTACGCTGTTCCAGAAGCTCTTCAGCAAGAGGACCGGGCTGGGCGCGCCCGGCCGCGACGCCC
GGGACCCAGATTGCGGGTTCAGTTGGCCTTTACCAGAGTTTGATCCAAGCCAGATTCGACTGATTGTATA
TCAAGACTGTGAAAGACGAGGGAGAAATGTTTTGTTTGACTCCAGTGTTAAGAGAAGAAATGAGGACATA
TCAGTATCGGGTTCTCGGTGCTCTTCTGATGCCAATATGCTTGGAGAGATGATGTTTGGCTCAGTAGCAA
TGAGCTACAAAGGATCCACCTTAAAAATTCATCAGATTCGTTCCCCTCCACAGCTCATGCTCAGCAAAGT
GTTTACTGCTCGGACTGGCAGCAGTATTTGTGGGAGTCTCAATACGCTACAAGATAGTCTTGAATTCATC
AATCAGGACAACAATACATTAAAGGCTGATAATAACACAGTTATTAATGGACTGCTTGGAAATATAGGTC
TTTCACAGTTCTGCAGCCCCAGGCGGGCATTCTCTGAGCAGGGTCCGCTCCGCCTGATCAGGAGCGCCTC
TTTCTTTGCAGTTCACAGCAACCCAATGGACATGCCTGGAAGAGAGCTCAATGAGGACAGAGACAGTGGC
ATAGCACGGTCTGCATCTCTCAGCAGCTTGCTGATCACTCCATTTCCTTCCCCAAACTCCTCACTTACCC
GAAGTTGTGCCAGCAGCTACCAGCGACGTTGGCGACGCAGCCAAACAACAAGTTTGGAAAATGGGGTATT
TCCTAGATGGTCTATAGAAGAAAGCTTTAATCTCTCAGATGAAAGCTGTGGCCCTAACCCAGGAATTGTG
CGGAAAAAGAAGATTGCAATTGGGGTAATCTTTTCATTGTCCAAAGATGAAGATGAAAATAACAAATTTA
ATGAATTCTTTTTTTCACATTTTCCTCTCTTTGAAAGCCACATGAACAAATTAAAGAGTGCAATAGAACA
GGCTATGAAAATGAGCCGGAGATCAGCTGATGCCAGTCAGAGAAGTTTGGCATATAATCGAATAGTTGAT
GCCCTAAATGAATTCAGAACAACAATTTGTAATCTTTACACGATGCCACGAATTGGAGAACCTGTCTGGC
TTACAATGATGTCGGGGACTCCAGAAAAGAACCACCTTTGCTATCGTTTCATGAAGGAGTTCACCTTTCT
AATGGAAAATGCTTCCAAAAATCAATTCTTGCCAGCTCTCATTACTGCAGTTCTGACCAATCATCTTGCC
TGGGTTCCAACAGTCATGCCAAATGGACAACCACCTATAAAAATATTTTTAGAAAAGCATTCCTCTCAGA
GTGTGGACATGTTGGCAAAGACTCATCCATATAACCCACTTTGGGCACAACTGGGAGACTTGTATGGCGC
TATTGGCTCTCCCGTACGGTTAGCAAGGACTGTGGTAGTTGGCAAACGACAAGACATGGTCCAGAGGCTA
CTTTATTTTCTTACTTATTTTATAAGATGCTCTGAACTTCAAGAAACGCATCTTTTAGAAAATGGAGAAG
ATGAAGCCATCGTTATGCCAGGCACAGTAATTACTACCACTTTAGAGAAAGGTGAAATAGAAGAATCAGA
GTATGTCCTTGTCACAATGCATAGAAACAAAAGCAGTTTGCTCTTTAAAGAGTCAGAAGAAATTAGAACT
CCCAATTGTAACTGTAAATATTGCAGTCATCCACTCCTTGGGCAAAATGTAGAGAACATTTCACAACAAG
AGAGAGAAGATATTCAAAACAGCTCTAAGGAGCTGCTAGGAATTTCAGATGAGTGCCAGATGATTTCTCC
TTCTGACTGCCAAGAAGAAAATGCTGTTGATGTTAAACAGTACAGAGATAAATTAAGAACTTGCTTTGAC
GCCAAGTTAGAGACAGTTGTTTGCACAGGATCTGTTCCAGTAGACAAATGTGCATTGTCAGAGTCAGGCT
TAGAGTCAACAGAGGAAACATGGCAGAGTGAGAAGTTGCTGGATTCAGACAGTCACACAGGCAAAGCAAT
GAGATCCACAGGAATGGTTGTGGAAAAAAAACCTCCAGATAAGATTGTGCCTGCTTCATTTTCTTGTGAG
GCTGCCCAGACAAAGGTTACTTTCCTGATTGGGGATTCTATGTCACCTGATTCAGATACTGAGCTTCGAA
GTCAGGCAGTGGTGGATCAGATTACCAGACATCACACCAAACCATTGAAGGAAGAAAGAGGGGCTATTGA
TCAGCATCAAGAAACTAAACAAACAACCAAGGACCAATCTGGAGAGTCTGATACACAGAACATGGTTTCT
GAAGAGCCCTGTGAACTTCCCTGTTGGAATCATTCAGACCCAGAAAGCATGAGCTTATTCGACGAATATT
TTAATGATGATTCAATCGAAACCAGGACTATTGATGATGTTCCATTTAAAACAAGTACAGATAGTAAAGA
CCATTGCTGTATGTTAGAGTTTTCAAAAATATTGTGTACAAAAAATAACAAGCAGAACAATGAATTTTGT
AAATGTATAGAAACAGTTCCCCAAGATTCATGTAAAACCTGCTTTCCTCAGCAGGACCAAAGAGATACAC
TCTCCATTCTTGTCCCCCATGGGGATAAAGAGAGTTCAGATAAAAAAATTGCTGTAGGAACTGAATGGGA
CATTCCAAGAAATGAAAGTTCAGACAGTGCCCTTGGGGATAGTGAAAGTGAAGATACAGGTCATGATATG
ACTAGACAAGTTAGCAGTTATTATGGAGGAGAGCAAGAAGATTGGGCAGAAGAGGATGAGATACCTTTTC
CTGGGTCAAAGTTAATCGAAGTGAGTGCTGTTCAGCCCAACATTGCCAACTTCGGGAGGTCCTTGCTGGG
TGGCTACTGCTCATCTTATGTGCCTGACTTTGTTCTTCAAGGAATTGGGAGTGATGAGAGGTTCCGTCAG
TGTCTGATGTCAGATTTATCTCATGCTGTGCAGCATCCAGTTTTGGATGAACCAATAGCAGAAGCTGTCT
GTATTATAGCTGACATGGATAAATGGACTGTTCAAGTGGCCAGTAGCCAGAGACGAGTGACAGATAATAA
ATTGGGAAAGGAAGTATTGGTTTCCAGTCTTGTTTCCAATCTGCTTCATTCCACACTTCAGCTTTATAAG
CATAACTTGTCTCCAAATTTTTGTGTAATGCATCTTGAAGACCGGTTGCAGGAGCTATACTTCAAAAGTA
AAATGCTGTCTGAATACCTGAGGGGGCAGATGCGTGTTCATGTCAAGGAGCTGGGAGTGGTTCTGGGGAT
TGAATCCAGTGATCTTCCACTTCTGGCTGCTGTAGCAAGCACTCACTCTCCATATGTTGCACAAATACTC
CTTTAA

Translation (1121 aa):
MAPTLFQKLFSKRTGLGAPGRDARDPDCGFSWPLPEFDPSQIRLIVYQDCERRGRNVLFDSSVKRRNEDI
SVSGSRCSSDANMLGEMMFGSVAMSYKGSTLKIHQIRSPPQLMLSKVFTARTGSSICGSLNTLQDSLEFI
NQDNNTLKADNNTVINGLLGNIGLSQFCSPRRAFSEQGPLRLIRSASFFAVHSNPMDMPGRELNEDRDSG
IARSASLSSLLITPFPSPNSSLTRSCASSYQRRWRRSQTTSLENGVFPRWSIEESFNLSDESCGPNPGIV
RKKKIAIGVIFSLSKDEDENNKFNEFFFSHFPLFESHMNKLKSAIEQAMKMSRRSADASQRSLAYNRIVD
ALNEFRTTICNLYTMPRIGEPVWLTMMSGTPEKNHLCYRFMKEFTFLMENASKNQFLPALITAVLTNHLA
WVPTVMPNGQPPIKIFLEKHSSQSVDMLAKTHPYNPLWAQLGDLYGAIGSPVRLARTVVVGKRQDMVQRL
LYFLTYFIRCSELQETHLLENGEDEAIVMPGTVITTTLEKGEIEESEYVLVTMHRNKSSLLFKESEEIRT
PNCNCKYCSHPLLGQNVENISQQEREDIQNSSKELLGISDECQMISPSDCQEENAVDVKQYRDKLRTCFD
AKLETVVCTGSVPVDKCALSESGLESTEETWQSEKLLDSDSHTGKAMRSTGMVVEKKPPDKIVPASFSCE
AAQTKVTFLIGDSMSPDSDTELRSQAVVDQITRHHTKPLKEERGAIDQHQETKQTTKDQSGESDTQNMVS
EEPCELPCWNHSDPESMSLFDEYFNDDSIETRTIDDVPFKTSTDSKDHCCMLEFSKILCTKNNKQNNEFC
KCIETVPQDSCKTCFPQQDQRDTLSILVPHGDKESSDKKIAVGTEWDIPRNESSDSALGDSESEDTGHDM
TRQVSSYYGGEQEDWAEEDEIPFPGSKLIEVSAVQPNIANFGRSLLGGYCSSYVPDFVLQGIGSDERFRQ
CLMSDLSHAVQHPVLDEPIAEAVCIIADMDKWTVQVASSQRRVTDNKLGKEVLVSSLVSNLLHSTLQLYK
HNLSPNFCVMHLEDRLQELYFKSKMLSEYLRGQMRVHVKELGVVLGIESSDLPLLAAVASTHSPYVAQIL
L


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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