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Report for CCDS87319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87319.1 Public Homo sapiens 5 SRP19 24 110 108 CCDS HistoryNCBI Gene:6728Re-query CCDS DB by CCDS ID:87319.1Re-query CCDS DB by GeneID:6728See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391338.3 ENSP00000375133.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391338.3Link to Ensembl Protein Viewer:ENSP00000375133.2Re-query CCDS DB by Nucleotide ID:ENST00000391338Re-query CCDS DB by Protein ID:ENSP00000375133
Original member Current member NCBI NM_001204199.2 NP_001191128.1 Accepted alive Link to Nucleotide Sequence:NM_001204199.2Link to Protein Sequence:NP_001191128.1Re-query CCDS DB by Nucleotide ID:NM_001204199Re-query CCDS DB by Protein ID:NP_001191128Link to BLAST:NP_001191128.1

Chromosomal Locations for CCDS 87319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 112861377 112861417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112862508 112862583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112864457 112864528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112864621 112864732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 112891603 112891607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGGCTTGCGCTGCCGCGCGGTCCCCGGCCGACCAGGACAGGTTTATTTGTATCTATCCTGCTTATTTAA
ATAATAAGAAGACCATCGCAGAGGGAAGGCGAATCCCCATAAGTAAGGCTGTTGAAAATCCTACAGCTAC
AGAGATTCAAGATGTATGTTCAGCAGTTGGACTTAACGTATTTCTTGAGAAAAATAAAATGTACTCTAGA
GAATGGAATCGTGATGTCCAATACAGAGGCAGAGTCCGGGTCCAGCTCAAACAGGAAGATGGGAGCCTCT
GCCTTGTACAGTTCCCATCACGTTAA

Translation (101 aa):
MACAAARSPADQDRFICIYPAYLNNKKTIAEGRRIPISKAVENPTATEIQDVCSAVGLNVFLEKNKMYSR
EWNRDVQYRGRVRVQLKQEDGSLCLVQFPSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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