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Report for CCDS86985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86985.1 Public Homo sapiens 21 CFAP298 24 110 108 CCDS HistoryNCBI Gene:56683Re-query CCDS DB by CCDS ID:86985.1Re-query CCDS DB by GeneID:56683See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000440966.5 ENSP00000411467.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440966.5Link to Ensembl Protein Viewer:ENSP00000411467.1Re-query CCDS DB by Nucleotide ID:ENST00000440966Re-query CCDS DB by Protein ID:ENSP00000411467
Original member Current member NCBI NM_001350336.2 NP_001337265.1 Accepted alive Link to Nucleotide Sequence:NM_001350336.2Link to Protein Sequence:NP_001337265.1Re-query CCDS DB by Nucleotide ID:NM_001350336Re-query CCDS DB by Protein ID:NP_001337265Link to BLAST:NP_001337265.1

Chromosomal Locations for CCDS 86985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 32601863 32601973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32603161 32603292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32604125 32604283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32607649 32607716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32609838 32610005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 32612105 32612243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (777 nt):
ATGGTTCTGCTGCACGTGAAGCGGGGCGACGAGAGCCAGTTCCTGCTGCAGGCGCCTGGGAGTACCGAGC
TGGAGGAGCTCACGGTGCAGGTGGCCCGGGTCTATAATGGGCGGCTCAAGGTGCAGCGCCTCTGCTCAGA
AATGGAAGAATTAGCCGAACATGGCATATTTCTCCCTCCTAATATGCAAGGACTGACCGATGATCAGATT
GAAGAATTGAAATTGAAGGATGAATGGGGTGAAAAATGCGTACCCAGCGGAGGTGCAGTGTTTAAAAAGG
ATGATATTGGACGAAGGAATGGGCAAGCTCCAAATGAGAAGATGAAGCAAGTGTTAAAGAAGACTATAGA
AGAAGCCAAAGCAATAATATCTAAGAAACAAGTGGAAGCCGGTGTCTGTGTTACCATGGAGATGGTGAAA
GATGCCTTGGACCAGCTTCGAGGCGCGGTGATGATTGTTTACCCCATGGGGTTGCCACCGTATGATCCCA
TCCGCATGGAGTTTGAAAATAAGGAAGACTTGTCGGGAACACAGGCAGGGCTCAACGTCATTAAAGAGGC
AGAGGCGCAGCTGTGGTGGGCAGCCAAGGAGCTGAGAAGAACGAAGAAGCTTTCAGACTACGTGGGGAAG
AATGAAAAAACCAAAATTATCGCCAAGATTCAGCAAAGATTGGAAGAAAATGATGATGATGCCTATTTAA
ACTCACCATGGGCGGATAACACTGCTTTGAAAAGACATTTTCATGGAGTGAAAGACATAAAGTGGAGACC
AAGATGA

Translation (258 aa):
MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPPNMQGLTDDQI
EELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVK
DALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGK
NEKTKIIAKIQQRLEENDDDAYLNSPWADNTALKRHFHGVKDIKWRPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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