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Report for CCDS86783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86783.1 Public Homo sapiens 19 CALM3 24 110 108 CCDS HistoryNCBI Gene:808Re-query CCDS DB by CCDS ID:86783.1Re-query CCDS DB by GeneID:808See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86783.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391918.6 ENSP00000375785.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391918.6Link to Ensembl Protein Viewer:ENSP00000375785.2Re-query CCDS DB by Nucleotide ID:ENST00000391918Re-query CCDS DB by Protein ID:ENSP00000375785
Original member Current member EBI ENST00000594523.5 ENSP00000468877.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594523.5Link to Ensembl Protein Viewer:ENSP00000468877.1Re-query CCDS DB by Nucleotide ID:ENST00000594523Re-query CCDS DB by Protein ID:ENSP00000468877
Original member Current member EBI ENST00000598871.5 ENSP00000470502.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598871.5Link to Ensembl Protein Viewer:ENSP00000470502.1Re-query CCDS DB by Nucleotide ID:ENST00000598871Re-query CCDS DB by Protein ID:ENSP00000470502
Original member Current member EBI ENST00000599839.5 ENSP00000471225.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599839.5Link to Ensembl Protein Viewer:ENSP00000471225.1Re-query CCDS DB by Nucleotide ID:ENST00000599839Re-query CCDS DB by Protein ID:ENSP00000471225
Original member Current member NCBI NM_001329921.1 NP_001316850.1 Accepted alive Link to Nucleotide Sequence:NM_001329921.1Link to Protein Sequence:NP_001316850.1Re-query CCDS DB by Nucleotide ID:NM_001329921Re-query CCDS DB by Protein ID:NP_001316850Link to BLAST:NP_001316850.1
Original member Current member NCBI NM_001329923.1 NP_001316852.1 Accepted alive Link to Nucleotide Sequence:NM_001329923.1Link to Protein Sequence:NP_001316852.1Re-query CCDS DB by Nucleotide ID:NM_001329923Re-query CCDS DB by Protein ID:NP_001316852Link to BLAST:NP_001316852.1
Original member Current member NCBI NM_001329924.2 NP_001316853.1 Accepted alive Link to Nucleotide Sequence:NM_001329924.2Link to Protein Sequence:NP_001316853.1Re-query CCDS DB by Nucleotide ID:NM_001329924Re-query CCDS DB by Protein ID:NP_001316853Link to BLAST:NP_001316853.1
Original member Current member NCBI NM_001329925.2 NP_001316854.1 Accepted alive Link to Nucleotide Sequence:NM_001329925.2Link to Protein Sequence:NP_001316854.1Re-query CCDS DB by Nucleotide ID:NM_001329925Re-query CCDS DB by Protein ID:NP_001316854Link to BLAST:NP_001316854.1
Original member Current member NCBI NM_001329926.2 NP_001316855.1 Accepted alive Link to Nucleotide Sequence:NM_001329926.2Link to Protein Sequence:NP_001316855.1Re-query CCDS DB by Nucleotide ID:NM_001329926Re-query CCDS DB by Protein ID:NP_001316855Link to BLAST:NP_001316855.1

Chromosomal Locations for CCDS 86783.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46608271 46608340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46608482 46608588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46608846 46608981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46609125 46609153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGAGATCCCTGGGACAGAACCCCACTGAAGCAGAGCTGCAGGATATGATCAATGAGGTGGATGCAGATG
GGAACGGGACCATTGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGACAGTGA
GGAGGAGATCCGAGAGGCGTTCCGTGTCTTTGACAAGGATGGGAATGGCTACATCAGCGCCGCAGAGCTG
CGTCACGTAATGACGAACCTGGGGGAGAAGCTGACCGATGAGGAGGTGGATGAGATGATCAGGGAGGCTG
ACATCGATGGAGATGGCCAGGTCAATTATGAAGAGTTTGTACAGATGATGACTGCAAAGTGA

Translation (113 aa):
MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL
RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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