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Report for CCDS86257.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86257.1 Public Homo sapiens 11 OR10D3 24 110 108 CCDS HistoryNCBI Gene:26497Re-query CCDS DB by CCDS ID:86257.1Re-query CCDS DB by GeneID:26497See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86257.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318666.6 ENSP00000323895.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000318666.6Link to Ensembl Protein Viewer:ENSP00000323895.6Re-query CCDS DB by Nucleotide ID:ENST00000318666Re-query CCDS DB by Protein ID:ENSP00000323895
Original member Current member EBI ENST00000641351.3 ENSP00000493028.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641351.3Link to Ensembl Protein Viewer:ENSP00000493028.1Re-query CCDS DB by Nucleotide ID:ENST00000641351Re-query CCDS DB by Protein ID:ENSP00000493028
Original member Current member EBI ENST00000641546.1 ENSP00000493231.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641546.1Link to Ensembl Protein Viewer:ENSP00000493231.1Re-query CCDS DB by Nucleotide ID:ENST00000641546Re-query CCDS DB by Protein ID:ENSP00000493231
Original member Current member NCBI NM_001355213.3 NP_001342142.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001355213.3Link to Protein Sequence:NP_001342142.1Re-query CCDS DB by Nucleotide ID:NM_001355213Re-query CCDS DB by Protein ID:NP_001342142Link to BLAST:NP_001342142.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342142.1 312 Q8NH80 312 100% 0 0

Chromosomal Locations for CCDS 86257.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124185270 124186208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGAGGTGAAGAACTGCTGCATGGTGACAGAGTTCATCCTTTTGGGAATCCCACACACAGAGGGGCTGG
AGATGACACTTTTTGTCTTATTCTTGCCCTTCTATGCCTGCACTCTACTGGGAAATGTGTCTATCCTTGT
TGCTGTTATGTCTTCTGCTCGCCTTCACACACCTATGTATTTCTTCCTGGGAAACTTGTCTGTGTTTGAC
ATGGGTTTCTCCTCAGTGACTTGTCCCAAAATGCTGCTCTACCTTATGGGGCTGAGCCGACTCATCTCCT
ACAAAGACTGTGTCTGCCAGCTTTTCTTCTTCCATTTCCTCGGGAGCATTGAGTGCTTCTTGTTTACGGT
GATGGCCTATGACCGCTTCACTGCCATCTGTTATCCTCTGCGATACACAGTCATCATGAACCCAAGGATC
TGTGTGGCCCTGGCTGTGGGCACATGGCTGTTAGGGTGCATTCATTCCAGTATCTTGACCTCCCTCACCT
TCACCTTGCCATACTGTGGTCCCAATGAAGTGGATCACTTCTTCTGTGACATTCCAGCACTGTTGCCCTT
GGCCTGTGCTGACACATCCTTAGCCCAGAGGGTGAGCTTCACCAACGTTGGCCTCATATCTCTTGTCTGC
TTTCTGCTAATTCTTTTATCCTACACTAGAATCACAATATCTATCTTAAGCATTCGTACAACTGAGGGCC
GTCGCCGTGCCTTCTCCACCTGCAGTGCTCACCTCATTGCCATCCTCTGTGCCTATGGGCCCATCATCAC
TGTCTACCTGCAGCCCACACCCAACCCCATGCTGGGAACCGTGGTACAAATTCTCATGAATCTGGTAGGA
CCAATGCTGAACCCTTTGATCTATACCTTGAGGAATAAGGAAGTAAAAACAGCCCTGAAAACAATATTGC
ACAGGACAGGCCATGTTCCTGAGAGTTAG

Translation (312 aa):
MEVKNCCMVTEFILLGIPHTEGLEMTLFVLFLPFYACTLLGNVSILVAVMSSARLHTPMYFFLGNLSVFD
MGFSSVTCPKMLLYLMGLSRLISYKDCVCQLFFFHFLGSIECFLFTVMAYDRFTAICYPLRYTVIMNPRI
CVALAVGTWLLGCIHSSILTSLTFTLPYCGPNEVDHFFCDIPALLPLACADTSLAQRVSFTNVGLISLVC
FLLILLSYTRITISILSIRTTEGRRRAFSTCSAHLIAILCAYGPIITVYLQPTPNPMLGTVVQILMNLVG
PMLNPLIYTLRNKEVKTALKTILHRTGHVPES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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