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Report for CCDS86164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86164.1 Public Homo sapiens 11 TNNT3 24 110 108 CCDS HistoryNCBI Gene:7140Re-query CCDS DB by CCDS ID:86164.1Re-query CCDS DB by GeneID:7140See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381563.8 ENSP00000370975.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381563.8Link to Ensembl Protein Viewer:ENSP00000370975.4Re-query CCDS DB by Nucleotide ID:ENST00000381563Re-query CCDS DB by Protein ID:ENSP00000370975
Original member Current member NCBI NM_001363561.2 NP_001350490.1 Accepted alive Link to Nucleotide Sequence:NM_001363561.2Link to Protein Sequence:NP_001350490.1Re-query CCDS DB by Nucleotide ID:NM_001363561Re-query CCDS DB by Protein ID:NP_001350490Link to BLAST:NP_001350490.1
Original member Current member NCBI NM_001367847.1 NP_001354776.1 Accepted alive Link to Nucleotide Sequence:NM_001367847.1Link to Protein Sequence:NP_001354776.1Re-query CCDS DB by Nucleotide ID:NM_001367847Re-query CCDS DB by Protein ID:NP_001354776Link to BLAST:NP_001354776.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350490.1 261 P45378-3 261 100% 0 0
NP_001354776.1 261 P45378-3 261 100% 0 0

Chromosomal Locations for CCDS 86164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 1922875 1922891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1923048 1923061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1923555 1923572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1925099 1925116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1925256 1925276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1926470 1926481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1926695 1926709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1929810 1929828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1932469 1932514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1933721 1933837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1933931 1934008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934332 1934445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934546 1934655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934829 1934919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1936963 1937003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1938438 1938492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGTCTGACGAGGAAGTTGAACAGGTGGAGGAGCAGTACGAAGAAGAAGAGGAAGCCCAGGAGGAAGCTG
CAGAAGTCCATGAGGAAGTTCATGAACCAGAGGAAGTTCAAGAAGAGGAGAAACCGAGACCCAAACTCAC
TGCTCCTAAGATCCCAGAAGGGGAGAAAGTGGACTTCGATGACATCCAGAAGAAGCGTCAGAACAAAGAC
CTAATGGAGCTCCAGGCCCTCATCGACAGCCACTTTGAAGCCCGGAAGAAGGAGGAGGAGGAGCTGGTCG
CTCTCAAAGAGAGAATCGAGAAGCGCCGTGCAGAGAGAGCGGAGCAGCAGAGGATTCGTGCAGAGAAGGA
GAGGGAGCGCCAGAACAGACTGGCGGAGGAAAAGGCCAGAAGGGAGGAGGAGGATGCCAAGAGGAGGGCA
GAGGACGACCTGAAGAAGAAGAAAGCTCTGTCTTCCATGGGAGCCAACTACAGCAGCTACCTGGCCAAGG
CTGACCAGAAGAGAGGCAAGAAGCAGACAGCCCGGGAAATGAAGAAGAAGATTCTGGCTGAGAGACGCAA
GCCGCTCAACATCGATCACCTTGGTGAAGACAAACTGAGGGACAAGGCCAAGGAGCTCTGGGAGACCCTG
CACCAGCTGGAGATTGACAAGTTCGAGTTTGGGGAGAAGCTGAAACGCCAGAAATATGACATCACCACGC
TCAGGAGCCGCATTGACCAGGCCCAGAAGCACAGCAAGAAGGCTGGGACCCCAGCCAAGGGCAAAGTCGG
CGGGCGCTGGAAGTAG

Translation (261 aa):
MSDEEVEQVEEQYEEEEEAQEEAAEVHEEVHEPEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKD
LMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRA
EDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETL
HQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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