NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS86069.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86069.1 Public Homo sapiens 10 CELF2 24 110 108 CCDS HistoryNCBI Gene:10659Re-query CCDS DB by CCDS ID:86069.1Re-query CCDS DB by GeneID:10659See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86069.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637215.1 ENSP00000490185.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000637215.1Link to Ensembl Protein Viewer:ENSP00000490185.1Re-query CCDS DB by Nucleotide ID:ENST00000637215Re-query CCDS DB by Protein ID:ENSP00000490185
Original member Current member NCBI NM_001326327.2 NP_001313256.1 Accepted alive Link to Nucleotide Sequence:NM_001326327.2Link to Protein Sequence:NP_001313256.1Re-query CCDS DB by Nucleotide ID:NM_001326327Re-query CCDS DB by Protein ID:NP_001313256Link to BLAST:NP_001313256.1

Chromosomal Locations for CCDS 86069.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 10798765 10798817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 10919964 10919999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11165486 11165682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11217425 11217507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11249153 11249201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11257738 11257872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11266598 11266677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11270666 11270824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11275057 11275120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11288418 11288552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11314139 11314258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11321189 11321386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11325836 11325979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 11328926 11329053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGGTTTCCTTGGTCTCTGACTTGGATCCTCTGAAAAACTGGAAAGTTTTAAGAGAGACGGCCACAGAGT
TAGCTGGGAGTCTACCAAGTAACGGCACAGCCAACAAGATGAACGGAGCTTTGGATCACTCAGACCAACC
AGACCCAGATGCCATTAAGATGTTTGTCGGACAGATCCCCCGGTCATGGTCGGAAAAGGAGCTGAAAGAA
CTTTTTGAGCCTTACGGAGCCGTCTACCAGATCAACGTCCTCCGGGACCGGAGTCAGAACCCTCCGCAGA
GTAAAGGTTGTTGTTTCGTAACATTTTATACAAGAAAAGCTGCACTTGAGGCCCAGAATGCACTGCACAA
TATTAAAACTTTACCTGGGATGCATCATCCCATTCAGATGAAACCTGCAGATAGTGAAAAGTCCAACGCT
GTGGAAGACAGAAAATTGTTCATAGGAATGGTATCGAAGAAATGTAATGAGAACGACATCAGGGTGATGT
TCTCTCCATTTGGCCAGATAGAAGAATGCCGGATCCTCCGGGGACCTGATGGGCTGAGTCGAGGCTGTGC
GTTTGTCACATTTTCTACAAGGGCAATGGCACAGAATGCAATCAAAGCCATGCATCAGTCTCAGACCATG
GAGGGCTGCTCTTCACCTATCGTGGTGAAGTTTGCTGACACTCAGAAGGACAAAGAGCAAAGGCGCCTCC
AGCAGCAGCTCGCTCAGCAGATGCAGCAGCTCAACACTGCCACCTGGGGGAACCTGACAGGGCTGGGCGG
ACTGACCCCACAGTATCTGGCGCTCCTGCAGCAGGCCACCTCCTCCAGCAACCTGGGTGCGTTCAGCGGC
ATTCAACAAATGGCAGGCATGAATGCTTTACAGTTGCAGAACCTGGCGACGCTGGCTGCTGCTGCAGCTG
CGGCCCAGACCTCAGCCACCAGCACCAATGCAAACCCTCTCTCTACCACGAGCAGCGCCCTGGGAGCCCT
CACGAGTCCCGTGGCTGCTTCAACCCCCAACTCCACTGCTGGTGCAGCCATGAACTCCTTGACCTCTCTC
GGGACTCTGCAAGGACTGGCTGGAGCCACTGTTGGACTGAATAATATTAATGCACTAGCAGTTGCTCAAA
TGCTCTCAGGTATGGCGGCTCTGAATGGAGGACTTGGCGCCACAGGCTTGACGAATGGCACGGCTGGCAC
CATGGACGCCCTCACCCAGGCCTACTCAGGAATTCAACAGTACGCAGCCGCCGCGCTGCCCACTCTGTAC
AGCCAGAGCCTGCTGCAGCAGCAGAGCGCTGCAGGCAGCCAGAAGGAAGGTCCAGAGGGGGCAAACCTCT
TTATTTACCACCTTCCACAGGAATTTGGAGACCAGGACATTCTGCAGATGTTCATGCCTTTTGGAAATGT
TATCTCTGCTAAAGTCTTCATTGACAAACAGACCAATCTGAGCAAGTGCTTTGGTTTTGTTAGCTACGAC
AATCCAGTCTCTGCACAAGCTGCTATCCAAGCTATGAATGGCTTTCAGATCGGCATGAAACGCTTGAAGG
TGCAGCTGAAGCGTTCCAAAAACGACAGCAAACCTTACTGA

Translation (526 aa):
MVSLVSDLDPLKNWKVLRETATELAGSLPSNGTANKMNGALDHSDQPDPDAIKMFVGQIPRSWSEKELKE
LFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGMHHPIQMKPADSEKSNA
VEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTM
EGCSSPIVVKFADTQKDKEQRRLQQQLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSG
IQQMAGMNALQLQNLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSL
GTLQGLAGATVGLNNINALAVAQMLSGMAALNGGLGATGLTNGTAGTMDALTQAYSGIQQYAAAALPTLY
SQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYD
NPVSAQAAIQAMNGFQIGMKRLKVQLKRSKNDSKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH