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Report for CCDS85535.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85535.1 Public Mus musculus 8 Stox2 23 108 98 CCDS HistoryNCBI Gene:71069Re-query CCDS DB by CCDS ID:85535.1Re-query CCDS DB by GeneID:71069See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85535.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000211737.1 ENSMUSP00000147477.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000211737.1Link to Ensembl Protein Viewer:ENSMUSP00000147477.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000211737Re-query CCDS DB by Protein ID:ENSMUSP00000147477
Original member Current member NCBI NM_001286376.1 NP_001273305.1 Accepted alive Link to Nucleotide Sequence:NM_001286376.1Link to Protein Sequence:NP_001273305.1Re-query CCDS DB by Nucleotide ID:NM_001286376Re-query CCDS DB by Protein ID:NP_001273305Link to BLAST:NP_001273305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273305.1 863 Q499E5-2 863 100% 0 0

Chromosomal Locations for CCDS 85535.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 47191680 47191686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47191839 47194104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47203121 47203273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47287880 47288045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2592 nt):
ATGAAGAAGACCCGGAGCACAACCTTGCGGCGAGCCTGGCCTAGCTCGGATTTCTCGGACCGGGCCTCGG
ACCGCATGAGGTCCCGCAGCGAGAAGGACTACCGCCTGCACAAGCGCTTCCCCGCGGCCTTCGCGCCCCA
GGCTTCTAGGGGCTACATGACATCAGGTGATGTGTCACCAATCAGTATGTCCCCCATCAGTCAGTCTCAG
TTTATTCCACTCGGGGAAATCCTTTGCTTGGCCATCTCTGCAATGAACTCTGCGAGAAAGCCTGTCACCC
AGGAGGCGCTGATGGAACACCTGACCACATGTTTCCCAGGTGTTCCAACCCCAAGCCAAGAAATTCTACG
GCATACCCTAAACACACTGGTACGGGAGAGGAAAATCTATCCGACTCCGGATGGCTATTTCATTGTGACC
CCACAGACTTATTTCATTACTCCCTCCCTCATAAGAACTAACAGTAAGTGGTACCACTTGGACGAGAGGG
TACCTGACAGGTCTCAGTGCACCTCGCCACAACCAGGAACCATAACGCCCTCTGCCTCAGGCTGCGTCAG
GGAAAGGACATTACCCAGAAAGCACTGCGACTCTTGCCACTGCTGCCGAGAAGACGTGCACAGCATGCAT
GCCTCCACCCTGCAGAGGAAGTCCGCCAAGGACTGCAAAGACCCTTACTGCCCTCCTCCGCTCTGCCAGG
TGCCGCCCACTGAAAAAAGCAAAAGCACTATAAATTTCTCCTATAAGACGGAAACTCTCTCGAAACCTAA
AGATGGTGAAAAGCAGTCCAAAAAATTCGGTCTCAAGTTATTCCGGCTGAGTTTTAAGAAAGACAAGACC
AAACAGCTGGCCAATTTCTCTGCCCAGTTTCCTCCCGAGGAGTGGCCTCTGCGAGACGAGGACACGCCCA
CGACCATCCCTCGGGAAGTGGAGATGGAGATCATCCGGCGGATCAACCCAGACTTGACGGTGGAAAATGT
CATGAGGCACACTGCCCTGATGAAGAAACTTGAAGAAGAAAAAGCTCACCGGAGCAAAGCCGGGTCCTCC
GCCCACCACAGTGGAAGGAGTAAAAAGAGCCGGACTCACCGCAAGTCCCACGGGAAGTCTCGGTCACACA
GCAAGACGCGAGTGTCCAAAGGAGATCCTTCGGATGGCTCGCATCTGGATATCCCCGGTGAGAGGGAGTA
TGAATTTTGCGACCCTCTAACCAGGGCCCCCAGAGAGGGCTGCTTCATCATTGAACACAAAGGGGACAAC
TTCATCATGCATAGCAACACGAACGTGATCGAGTCCCATTTCCCCATGACGCCAGAATGGGATGTGTCTG
GCGAACTGGCCAAAAGGAGAACGGAGATGCCCTTTCCCGAACCCTCCAGGGGAAGCTCCCACTCCAAAGT
GCACCGAAGCCACAGCCATACCCAGGACCGGAGATCCAGGAATGAGAGGTCCAACAAGGCCAAGGAGAGA
TCCAGGTCTATGGATAACTCCAAAGGTCCCCTGGGCGCTTCTTCACTCGGGACTCCGGAAGACCTGGCTG
AAGGCTGCAGCCAAGATGACCAAACACCGAGCCAATCATACATTGATGACAGTACTTTAAGGCCTGCGCA
AACGATTGGTCATCAAAGGGCTCATATTCCTTCTGCCAGCTACAAAGAGGTATGCATTCCAGAAATAGTT
GGTGGCAGCAAGGAACCTTCTAGTGCTTGTAGCCTTCTGGAGCCAGGCAAAACCCCTGAGAGTATGCCGT
CCTATGGGGAACTCAGCCCTTGCCCGGCTAAAACAGCTGTGGATGACTATTTTCAGTGCAACACCTCGAG
TGAGACCGTACTCACAGCACCGTCCCCTTTAGGGAAGAATAAGGAGGACCATGACACTTTGACCTTGGTG
GAGGGGGTAAAAAAGCTGTCTCCATCTGAGAGGCAGACCCCCCATTCTTCCAGGGAACCTGTTGGGCACA
AGGAGGAGTCACCGAAAGGGCCAGGAGGGGGCCCTGCAGCCTCTGGTGGTGTGGCAGAGGGGTTAGCCAA
TGGCCGCCTTGTCCAACATCATAGCGCAGAACCCAGCAGCCTGGACAAAAGGAAAGAAATATTCAGCAAA
GACACACTGTTCAAACCTCTACACAGCACCCTGTCTGTAAACAGCTATCACAAATCTAGCTTGTCCCTCC
TCAAGTCTCACCCAAAGTCACCCGTTGACACACTGCCAGGCCGTTGTGAGAAACTGGAACCTTCCCTTGG
GACATCCGCGGCCCAAGCCATGCCTCCATCCCAACGTCAGCAGGAGCCTGGAGGGAACCAGGAGGCTTCT
TTTGACTATTACAACGTCTCTGATGACGACGACTCCGAGGAGGGGGCCAACAAAAACGCGGAGGAGGAGA
AAAACAGAGATGATGTGGGCACCATGCAGTGGCTCCTGGAGAGGGAGAAGGAAAGAGACTTGCAGAGGAA
GTTTGAGAAAAACCTCACCCTCCTCACCCCAAAAGAAACTGATAGCAGCAGCAACCAGAGAGCCACCCAC
TCAGCCCGGCTGGACAGCATGGATAGCAGCAGCATCACGGTGGACAGTGGATTCAACTCCCCACGGAATT
GA

Translation (863 aa):
MKKTRSTTLRRAWPSSDFSDRASDRMRSRSEKDYRLHKRFPAAFAPQASRGYMTSGDVSPISMSPISQSQ
FIPLGEILCLAISAMNSARKPVTQEALMEHLTTCFPGVPTPSQEILRHTLNTLVRERKIYPTPDGYFIVT
PQTYFITPSLIRTNSKWYHLDERVPDRSQCTSPQPGTITPSASGCVRERTLPRKHCDSCHCCREDVHSMH
ASTLQRKSAKDCKDPYCPPPLCQVPPTEKSKSTINFSYKTETLSKPKDGEKQSKKFGLKLFRLSFKKDKT
KQLANFSAQFPPEEWPLRDEDTPTTIPREVEMEIIRRINPDLTVENVMRHTALMKKLEEEKAHRSKAGSS
AHHSGRSKKSRTHRKSHGKSRSHSKTRVSKGDPSDGSHLDIPGEREYEFCDPLTRAPREGCFIIEHKGDN
FIMHSNTNVIESHFPMTPEWDVSGELAKRRTEMPFPEPSRGSSHSKVHRSHSHTQDRRSRNERSNKAKER
SRSMDNSKGPLGASSLGTPEDLAEGCSQDDQTPSQSYIDDSTLRPAQTIGHQRAHIPSASYKEVCIPEIV
GGSKEPSSACSLLEPGKTPESMPSYGELSPCPAKTAVDDYFQCNTSSETVLTAPSPLGKNKEDHDTLTLV
EGVKKLSPSERQTPHSSREPVGHKEESPKGPGGGPAASGGVAEGLANGRLVQHHSAEPSSLDKRKEIFSK
DTLFKPLHSTLSVNSYHKSSLSLLKSHPKSPVDTLPGRCEKLEPSLGTSAAQAMPPSQRQQEPGGNQEAS
FDYYNVSDDDDSEEGANKNAEEEKNRDDVGTMQWLLEREKERDLQRKFEKNLTLLTPKETDSSSNQRATH
SARLDSMDSSSITVDSGFNSPRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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