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Report for CCDS85366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85366.1 Public Mus musculus 7 Or51f23b 23 108 98 CCDS HistoryNCBI Gene:259117Re-query CCDS DB by CCDS ID:85366.1Re-query CCDS DB by GeneID:259117See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85366.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000210453.2 ENSMUSP00000148074.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210453.2Link to Ensembl Protein Viewer:ENSMUSP00000148074.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210453Re-query CCDS DB by Protein ID:ENSMUSP00000148074
Original member Current member EBI ENSMUST00000239110.1 ENSMUSP00000158910.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000239110.1Link to Ensembl Protein Viewer:ENSMUSP00000158910.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000239110Re-query CCDS DB by Protein ID:ENSMUSP00000158910
Original member Current member NCBI NM_147113.2 NP_667324.2 Accepted alive Link to Nucleotide Sequence:NM_147113.2Link to Protein Sequence:NP_667324.2Re-query CCDS DB by Nucleotide ID:NM_147113Re-query CCDS DB by Protein ID:NP_667324Link to BLAST:NP_667324.2

Chromosomal Locations for CCDS 85366.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102752983 102753927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCAACTTTCCAGAACACCACAGCTTCTTCCATCATTTTCCTGCTCACTGGTGTGCCCGGGCTGGAAG
CTTTCCACACCTGGATCTCCATTCCCTTCTGCTTTCTCTATGCAACTGCCCTGTCAGGGAACAGCCTGAT
TCTCTTTGTCATTATCACCCAGCCCAGCCTCCACGAGCCCATGTATTACTTCCTCTCCATGCTATCCACC
ACTGACCTCGGGCTCTCCATCTCCACTCTGGCCACCATGCTGGGGATATTCTGGTTCAACGCCAGGGAGA
TCAGCTTCAATGCCTGCTTGTCACAGATGTTCTTCATTAAACTCTTCACTGTCATGGAATCCTCAGTGCT
GTTGGCTATGGCTTATGATCGTTATGTGGCCATCTCCAACCCTCTTAGGTATGCCACTATTTTAACTGAT
TCCAGAATAGCTCAAATTGGGGTGACAATTGTCATCAGAGGGACTGTAATGTTGACACCGATGGTCGCAC
TTCTTAAGAGACTAACCTTCTGCAGCAGCCGTGTGCTCCACCACTCCTACTGTTTCCACCCCGATGTCAT
GAAGCTCTCATGCACAGACACCAGGATCAACAATGCAGTTGGATTGACTGCCATGATCTCTACTGTTGGT
GTGGACTCAGTCCTTATTCTCCTTTCCTACATCCTGATCATCAGAACTGTCCTCAGCATTGCTTCCCCAG
AAGAGAGGAAGAAAGCCTTCAGCACGTGTATCTCCCATATCGGGGCTGTAGCTATATTCTATATTCCATT
GATCAGTTTGTCCTTTGTTCACAGATTTGGGAAACGAGCTCCACCCTATGTACATACCATGATTGCTAAT
ACCTACCTGCTGATTCCTCCTGTCATGAACCCCATCATCTACAGTGTGAAGACCAAACAGATACGTAAAG
CTGTGATAAAAGTTTTCCAATCTAAAGAAATATAG

Translation (314 aa):
MPTFQNTTASSIIFLLTGVPGLEAFHTWISIPFCFLYATALSGNSLILFVIITQPSLHEPMYYFLSMLST
TDLGLSISTLATMLGIFWFNAREISFNACLSQMFFIKLFTVMESSVLLAMAYDRYVAISNPLRYATILTD
SRIAQIGVTIVIRGTVMLTPMVALLKRLTFCSSRVLHHSYCFHPDVMKLSCTDTRINNAVGLTAMISTVG
VDSVLILLSYILIIRTVLSIASPEERKKAFSTCISHIGAVAIFYIPLISLSFVHRFGKRAPPYVHTMIAN
TYLLIPPVMNPIIYSVKTKQIRKAVIKVFQSKEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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