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Report for CCDS85139.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85139.1 Public Mus musculus 6 Zfp637 23 108 98 CCDS HistoryNCBI Gene:232337Re-query CCDS DB by CCDS ID:85139.1Re-query CCDS DB by GeneID:232337See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85139.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112860.1 ENSMUSP00000108481.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112860.1Link to Ensembl Protein Viewer:ENSMUSP00000108481.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112860Re-query CCDS DB by Protein ID:ENSMUSP00000108481
Original member Current member EBI ENSMUST00000223041.1 ENSMUSP00000152569.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000223041.1Link to Ensembl Protein Viewer:ENSMUSP00000152569.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000223041Re-query CCDS DB by Protein ID:ENSMUSP00000152569
Original member NCBI NM_001346647.1 NP_001333576.1 Updated not alive Link to Nucleotide Sequence:NM_001346647.1Link to Protein Sequence:NP_001333576.1Re-query CCDS DB by Nucleotide ID:NM_001346647Re-query CCDS DB by Protein ID:NP_001333576
Current member NCBI NM_001346647.2 NP_001333576.1 Accepted alive Link to Nucleotide Sequence:NM_001346647.2Link to Protein Sequence:NP_001333576.1Re-query CCDS DB by Nucleotide ID:NM_001346647Re-query CCDS DB by Protein ID:NP_001333576Link to BLAST:NP_001333576.1
Original member NCBI NM_001346648.1 NP_001333577.1 Updated not alive Link to Nucleotide Sequence:NM_001346648.1Link to Protein Sequence:NP_001333577.1Re-query CCDS DB by Nucleotide ID:NM_001346648Re-query CCDS DB by Protein ID:NP_001333577
Current member NCBI NM_001346648.2 NP_001333577.1 Accepted alive Link to Nucleotide Sequence:NM_001346648.2Link to Protein Sequence:NP_001333577.1Re-query CCDS DB by Nucleotide ID:NM_001346648Re-query CCDS DB by Protein ID:NP_001333577Link to BLAST:NP_001333577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333576.1 286 Q80V23-2 286 100% 0 0
NP_001333577.1 286 Q80V23-2 286 100% 0 0

Chromosomal Locations for CCDS 85139.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 117843323 117843392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 117844983 117845773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (861 nt):
ATGTTTGGGTTCCCAACAGCTACCCTGCTGGACTGTCATGGAAGATACGCCCAGAATGTAGCCTTTTTCA
CATATTGGTGCATCTTACATGACTTCCCTCTCGTTTTACCAGATGTGATGACAGAAGCCCACAAGTATGA
TCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGGAACAA
AAGTCCCCGGAGTCTAAGGCCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGG
AATGTGGGAAGTCTTTCCGGCAGAAAGGGAGCCTAACGCTGCACGAGAGAATCCACACTGGTCAGAAGCC
CTTTGAGTGCACCCAGTGTGGGAAAAGCTTCAGGGCCAAGGGCAACCTGGTTACACATCAGCGGATCCAC
ACAGGAGAGAAGCCCTATCAGTGCAAAGAGTGTGGGAAAAGCTTCAGTCAGCGAGGCAGCCTGGCTGTCC
ACGAGAGACTCCACACTGGACAGAAACCCTACGAGTGTGCCATTTGCCAGAGGAGCTTCCGAAATCAAAG
TAACCTCGCCGTGCACCGAAGAGTTCACAGCGGTGAGAAGCCCTATAGATGCGACCAGTGTGGAAAAGCT
TTCAGCCAGAAAGGAAGCTTAATTGTGCACATCCGCGTCCACACGGGTCTGAAGCCCTACGCGTGTTCCC
ACTGCAGGAAGAGCTTCCATACCAGGGGCAACTGTCTCCTGCATGGAAAAGTCCACACGGGAGAGACACC
CTATCTCTGTGGCCAGTGTGGGAAAAGTTTCACTCAGAGAGGGAGCCTGGCTGTGCACCAGCGAAGCTGC
TCACAACGGCTCACTCTGTAA

Translation (286 aa):
MFGFPTATLLDCHGRYAQNVAFFTYWCILHDFPLVLPDVMTEAHKYDPSEATGSSSWDFQSSFRREKLEQ
KSPESKALQEDSPGVRQKVYDCQECGKSFRQKGSLTLHERIHTGQKPFECTQCGKSFRAKGNLVTHQRIH
TGEKPYQCKECGKSFSQRGSLAVHERLHTGQKPYECAICQRSFRNQSNLAVHRRVHSGEKPYRCDQCGKA
FSQKGSLIVHIRVHTGLKPYACSHCRKSFHTRGNCLLHGKVHTGETPYLCGQCGKSFTQRGSLAVHQRSC
SQRLTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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