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Report for CCDS84817.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84817.1 Public Mus musculus 4 Oog4 23 108 98 CCDS HistoryNCBI Gene:242737Re-query CCDS DB by CCDS ID:84817.1Re-query CCDS DB by GeneID:242737See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84817.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073641.3 ENSMUSP00000073325.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073641.3Link to Ensembl Protein Viewer:ENSMUSP00000073325.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000073641Re-query CCDS DB by Protein ID:ENSMUSP00000073325
Original member Current member NCBI NM_001347238.2 NP_001334167.1 Accepted alive Link to Nucleotide Sequence:NM_001347238.2Link to Protein Sequence:NP_001334167.1Re-query CCDS DB by Nucleotide ID:NM_001347238Re-query CCDS DB by Protein ID:NP_001334167Link to BLAST:NP_001334167.1

Chromosomal Locations for CCDS 84817.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 143437451 143438033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 143438650 143439234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 143439892 143440202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 143450253 143450282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGGCGAGCTGTGAAGAGTGTCCACCTCAAAATGTATCTTTCGAAGAAGACATTGTGAATATCAACCCCC
CACCCGCCCTCCAGAACCTGGCAATTCAGAGTCTACTGAGGGATGAGGCCTTGGCCATTTCTGCTCTCAA
GAACCTACCCCAGAATCTGTTCCCAGCAATTTTTGAAGCAGCCGTAATTGGTGGACGTATAGAGATCTTG
AAGGCCATGATACCTGTATGGCCCTTCCCATACCTTTCTTTAGGAAAGCTGATAAAGAATTGCAACCTGG
AGACTTTGAAGGCTATGCTTGAGGGAGTGGATATACTGCTTGCACAAAATGATCGCTCCAGTAGATGCAA
ACTCAGAGTGCTCGATTTAAGGAATGAATACCATACTTTGTGGAGAATATGGGGTGGATCCTATGAAGGT
AGAGGCTTGCCAGAGTTCATGACACAGCAGCAGCCAATGGAGAACTGTCCTGACTGTGGGGTGAATAAAG
AATTGAAGGTGACAACTGACCTCAACCTCGTGGATGGTGGACTTGATGAATCTGCCACATACTTGTTGCA
GTGGGCCCAGCAGAAAAAAGATTCCATTCATCTATGCTGTACGATGTTGAGAATTCATAGCTTACCCAAA
GACATATTCAGAGATATCCTCAAAATTGTAAATACAGGCTGTATACAGGAGCTTCACTTGAAGGAATTGT
ACACAGAAGAGTTGGTTTTTCTTATACCTTACCTGAGAGAAATGAACAATCTTCTTACATTCATGCTAAG
TAGCATCAGAGAAACCTGCAGAATGGATAACTCGACAAGGCTTGATGAAGAGAATATAAGCAGGTTTATT
TCTCGCCTTCCCAAATTCCACTGTCTGCAGAATCTCTATGTAAATGATATCACCCTTCTAGGAAACAACC
TGAAAGACTTCCTCAGGTGCCTGGGGAAGCCCTTGGAGACTCTTTGCCTCACTTCTTGTGACTTATCACA
GTCAGACTTGGATTACCTGCCCTGTTGCCAGAATACTTCTGCACTCAAACGTCTGAACCTGACTGCTACA
AGTTTGCGTGGTTTAGTCTTTCATCCTCTTGGAGTTCTCCTTGAGAGTGTTAGAGGTACACTGCAATCCC
TGGAATTAGAGTTGTGTTTTATGGAGGACTCTCAGATCAGTGCCATTTTGCCTGCCCTAAGCCAATGTTC
CCATCTCACAAAGGTCAATTTCTATGATAATGAACTCTCTCTGCCTATCCTGAGACAACTTCTATACCAC
ACAGCCAACCTGAGCCAGCTGACCTATGAGGTATACCCTGCCCCTCTAGAGTGCTATAATGACATGAATA
TAATACTAACACATAAGTTAGAAAATTTTTGTCCTGAGCTTCTGGACATAATCAGGGCCAATAGGCAGCC
CAACAGAGTCACATTTGCTACATCCAAATGTTTAATCTGTTGTGGGTCCTACGTTTATGATCTGGAGACC
CAGAGCTGCCTATACCAGAAAGATCTACTGGAAGATTGA

Translation (502 aa):
MASCEECPPQNVSFEEDIVNINPPPALQNLAIQSLLRDEALAISALKNLPQNLFPAIFEAAVIGGRIEIL
KAMIPVWPFPYLSLGKLIKNCNLETLKAMLEGVDILLAQNDRSSRCKLRVLDLRNEYHTLWRIWGGSYEG
RGLPEFMTQQQPMENCPDCGVNKELKVTTDLNLVDGGLDESATYLLQWAQQKKDSIHLCCTMLRIHSLPK
DIFRDILKIVNTGCIQELHLKELYTEELVFLIPYLREMNNLLTFMLSSIRETCRMDNSTRLDEENISRFI
SRLPKFHCLQNLYVNDITLLGNNLKDFLRCLGKPLETLCLTSCDLSQSDLDYLPCCQNTSALKRLNLTAT
SLRGLVFHPLGVLLESVRGTLQSLELELCFMEDSQISAILPALSQCSHLTKVNFYDNELSLPILRQLLYH
TANLSQLTYEVYPAPLECYNDMNIILTHKLENFCPELLDIIRANRQPNRVTFATSKCLICCGSYVYDLET
QSCLYQKDLLED


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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