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Report for CCDS84185.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84185.1 Public Mus musculus 15 Prr5 23 108 98 CCDS HistoryNCBI Gene:109270Re-query CCDS DB by CCDS ID:84185.1Re-query CCDS DB by GeneID:109270See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84185.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171460.7 ENSMUSP00000127890.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171460.7Link to Ensembl Protein Viewer:ENSMUSP00000127890.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171460Re-query CCDS DB by Protein ID:ENSMUSP00000127890
Original member Current member NCBI NM_001346662.1 NP_001333591.1 Accepted alive Link to Nucleotide Sequence:NM_001346662.1Link to Protein Sequence:NP_001333591.1Re-query CCDS DB by Nucleotide ID:NM_001346662Re-query CCDS DB by Protein ID:NP_001333591Link to BLAST:NP_001333591.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333591.1 378 Q812A5-2 378 100% 0 0

Chromosomal Locations for CCDS 84185.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84681210 84681319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84687903 84687983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84693464 84693512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84693759 84693816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84699121 84699212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84699591 84699731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84701364 84701499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84702718 84703187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGGGAGCCGGGCGCGGCGGGTACGGACGAGCGGGGCA
CGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGGAGTGATCGCGGTCTTCCA
GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGGCGTCCGGCAGCTGCTGAAGACGGAG
CTGGGGTCCTTCTTCACTGAGTACCTGCAGAACCAGCTGCTCACGAAGGGCATGGTGATTCTTCGTGACA
AGATTCGCTTCTACGAAGGACAGAAGCTGCTGGACTCATTGGCGGAGACCTGGGATTTCTTCTTCAGTGA
TGTGCTGCCAACCCTGCAGGCCATCTTCTATCCTGTGCAGGGCAAGGAGCCGTCGGTGCGCCAGCTCGCC
CTGCTGCATTTCCGGAACACCATCACCCTCAGCGTGAAGCTGGAGGACGCGCTGGCCCGCTCTCACGCGC
GTGTTCCCCCTGCCATCGCACAGATGCTGCTGGTACTGCAGGGGGTACATGAGTCCAGGGGTGTGACTGA
AGACTATCTGCGCCTCGAGACACTGATTCAGAAGGTGGTGTCGCCGTACCTGGGCACCTATGGTCTCTAT
TCCAATGAAGGACCTTGTACCCATTCCTGTATCCTCGAGAAACGATTCCTACGCCGCTCCCGCTCTGGGG
ATATCCTAGCCAAGAACCCAGTGGTGCGCTCCAAAAGCTACAACACTCCCCTGCTCAATCCTGTGGCCGA
GCATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCT
TGTCCGGAGCCCCAGGGCTTTGTGGACACGCCTGGCCAGGGCCCTTCGGGGACCTTCCGGTCTTCTCCAA
CACCCCACTCAGGGCCTTGCCCCAGCAGACTATACCCCCCTGCCCATTCCCCGGAACAGGGCCCAGGCCA
TGGCTCCCCATCCACCTCCAGCCCAGAGACTCTTGTGGACCAGATCCTGGAGTCCGCGGACTCAGACTCG
GAAGGGATATTCATTGACTTTGGGCGGGGAAGTCGCTCCAGTGTGTCTGACTTTGAGGCACCGGGAGGCC
GGCCAAGTGTTGTGTGA

Translation (378 aa):
MSSPSLSDLGKREPGAAGTDERGTQQRRACANATWNSIHNGVIAVFQRKGLPDQELFILNEGVRQLLKTE
LGSFFTEYLQNQLLTKGMVILRDKIRFYEGQKLLDSLAETWDFFFSDVLPTLQAIFYPVQGKEPSVRQLA
LLHFRNTITLSVKLEDALARSHARVPPAIAQMLLVLQGVHESRGVTEDYLRLETLIQKVVSPYLGTYGLY
SNEGPCTHSCILEKRFLRRSRSGDILAKNPVVRSKSYNTPLLNPVAEHEAEGTAASGTSIRRHSVSEMTS
CPEPQGFVDTPGQGPSGTFRSSPTPHSGPCPSRLYPPAHSPEQGPGHGSPSTSSPETLVDQILESADSDS
EGIFIDFGRGSRSSVSDFEAPGGRPSVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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