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Report for CCDS8358.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8358.2 Public Homo sapiens 11 BCO2 24 110 108 CCDS HistoryNCBI Gene:83875Re-query CCDS DB by CCDS ID:8358.2Re-query CCDS DB by GeneID:83875See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8358.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357685.11 ENSP00000350314.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357685.11Link to Ensembl Protein Viewer:ENSP00000350314.5Re-query CCDS DB by Nucleotide ID:ENST00000357685Re-query CCDS DB by Protein ID:ENSP00000350314
Original member Current member NCBI NM_031938.7 NP_114144.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031938.7Link to Protein Sequence:NP_114144.5Re-query CCDS DB by Nucleotide ID:NM_031938Re-query CCDS DB by Protein ID:NP_114144Link to BLAST:NP_114144.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114144.5 579 Q9BYV7-1 579 100% 0 0

Chromosomal Locations for CCDS 8358.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 112175602 112175689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112179278 112179482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112193474 112193697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112193879 112193994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112194653 112194755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112199699 112199827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112200613 112200773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112202023 112202190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112213724 112213861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112214762 112214944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112216220 112216330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 112217761 112217874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1740 nt):
ATGTTTTTTCGAGTCTTTCTCCATTTTATCAGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCTGTGA
TGGTGCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAAATACTCCTCAGAAAAAAGCCGTCTTTGGGCA
GTGTCGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT
CGAGTCTGGGGACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCGAATTGGACCTGGGAAATTCGAGT
TTGGGAAGGATAAGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGG
CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGCTAAAAACCGAATT
GTGATCTCAGAATTTGGCACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACGTTTCATGTCCA
GGTTTGAGCTGCCTGGTAAAGCTGCAGCCATGACTGACAATACTAATGTCAACTATGTGCGGTACAAGGG
TGATTACTACCTCTGCACTGAGACCAACTTTATGAATAAAGTGGACATTGAAACTCTGGAAAAAACAGAA
AAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAA
CAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGA
GAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGG
AAACCTTCTTACTACCATAGCTTTGGAATGACAAGGAACTATATAATTTTCATTGAACAACCTCTAAAGA
TGAACCTGTGGAAAATTGCCACTTCTAAAATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGGGAACC
CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC
AAACCTTTTGTTACATTTCATCAAATCAATGCCTTTGAGGACCAGGGCTGTGTTATAATTGATTTGTGCT
GTCAAGATAATGGAAGAACCCTAGAAGTTTACCAGTTACAGAATCTCAGGAAGGCTGGGGAAGGGCTTGA
TCAGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAGGTTTGTTTTGCCTTTAAATGTCAGTTTGAAT
GCCCCTGAGGGAGACAACCTGAGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGGCTGATGGAA
CGATCTGGTGCTCTCATGAAAATCTACATCAGGAGGACCTAGAAAAGGAAGGAGGCATTGAATTTCCTCA
GATCTACTATGATCGATTCAGTGGCAAAAAGTATCATTTCTTTTATGGCTGTGGCTTTCGGCATTTAGTG
GGGGATTCTCTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTTTGGAGAGAAGATGGCTTTTATC
CCTCAGAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAAGATGGTGGGGTTATTCTTTCTGTGGT
GATCACTCCCAACCAGAATGAAAGCAATTTTATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCTGGGC
CGAGCAGAGGTACCTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATCTGA

Translation (579 aa):
MFFRVFLHFIRSHSATAVDFLPVMVHRLPVFKRYMGNTPQKKAVFGQCRGLPCVAPLLTTVEEAPRGISA
RVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRI
VISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTE
KVDWSKFIAVNGATAHPHYDLDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKG
KPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYS
KPFVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVHNSAAKSFPRRFVLPLNVSLN
APEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFSGKKYHFFYGCGFRHLV
GDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELG
RAEVPVQMPYGFHGTFIPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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