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Report for CCDS83375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83375.1 Public Homo sapiens 9 PRUNE2 24 110 108 CCDS HistoryNCBI Gene:158471Re-query CCDS DB by CCDS ID:83375.1Re-query CCDS DB by GeneID:158471See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83375.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376717.6 ENSP00000365907.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376717.6Link to Ensembl Protein Viewer:ENSP00000365907.2Re-query CCDS DB by Nucleotide ID:ENST00000376717Re-query CCDS DB by Protein ID:ENSP00000365907
Original member Current member NCBI NM_001330680.2 NP_001317609.1 Accepted alive Link to Nucleotide Sequence:NM_001330680.2Link to Protein Sequence:NP_001317609.1Re-query CCDS DB by Nucleotide ID:NM_001330680Re-query CCDS DB by Protein ID:NP_001317609Link to BLAST:NP_001317609.1

Chromosomal Locations for CCDS 83375.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 76614570 76614600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76619340 76619387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76624452 76624490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76629192 76629290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76636471 76636557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76637418 76637549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76638186 76638288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76644739 76644912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76652483 76652683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76655423 76655502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76692074 76692141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGCTGAAGAGCTGTAGTCGTGCATCCTTCTCACCCTCCGTTAGAAAGCCTCCTCTCATCCTCAGAAGAC
TACTGTCAGAGGATGTAGGAATGGACATCCCCTTTGAAGAGGGCGTGCTGAGTCCCAGTGCTGCAGACAT
GAGGCCTGAACCTCCTAATTCTCTGGATCTTAATGACACTCATCCTCGGAGAATCAAGCTCACAGCCCCA
AATATCAATCTTTCTCTGGACCAAAGTGAAGGATCTATTCTCTCTGATGATAACTTGGACAGTCCAGATG
AAATTGACATCAATGTGGATGAACTTGATACCCCCGATGAAGCAGATTCTTTTGAGTACACTGGCCATGA
AGATCCCACAGCCAACAAAGATTCTGGCCAAGAGTCAGAGTCTATTCCAGAATATACGGCCGAAGAGGAA
CGGGAGGACAACCGGCTTTGGAGGACAGTGGTCATTGGAGAACAAGAGCAGCGCATTGACATGAAGGTCA
TCGAGCCCTACAGGAGAGTCATTTCTCACGGAGGATACTATGGGGACGGTCTAAATGCCATCATTGTGTT
TGCCGCCTGTTTTCTGCCAGACAGCAGTCGGGCGGATTACCACTATGTCATGGAAAATCTTTTCCTATAT
GTAATAAGTACTTTAGAGTTGATGGTAGCTGAAGACTATATGATTGTGTACTTGAATGGTGCAACCCCAA
GAAGGAGGATGCCAGGGCTAGGCTGGATGAAGAAATGCTACCAGATGATTGACAGACGGTTGAGGAAGAA
TTTGAAATCATTCATCATTGTTCATCCATCTTGGTTCATCAGAACAATCCTTGCTGTGACACGACCTTTT
ATAAGTTCAAAATTCAGCAGTAAAATTAAATATGTCAATAGCTTATCAGAACTCAGTGGGCTGATCCCAA
TGGATTGCATCCACATTCCAGAGAGCATCATCAAACTGGATGAAGAACTGAGGGAAGCATCAGAGGCAGC
TAAAACTAGCTGCCTTTACAATGATCCAGAAATGTCTTCTATGGAGAAGGATATTGACTTGAAGCTGAAA
GAAAAGCCTTAG

Translation (353 aa):
MLKSCSRASFSPSVRKPPLILRRLLSEDVGMDIPFEEGVLSPSAADMRPEPPNSLDLNDTHPRRIKLTAP
NINLSLDQSEGSILSDDNLDSPDEIDINVDELDTPDEADSFEYTGHEDPTANKDSGQESESIPEYTAEEE
REDNRLWRTVVIGEQEQRIDMKVIEPYRRVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLY
VISTLELMVAEDYMIVYLNGATPRRRMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPF
ISSKFSSKIKYVNSLSELSGLIPMDCIHIPESIIKLDEELREASEAAKTSCLYNDPEMSSMEKDIDLKLK
EKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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