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Report for CCDS8335.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8335.1 Public Homo sapiens 11 GUCY1A2 24 110 108 CCDS HistoryNCBI Gene:2977Re-query CCDS DB by CCDS ID:8335.1Re-query CCDS DB by GeneID:2977See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8335.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000526355.7 ENSP00000431245.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000526355.7Link to Ensembl Protein Viewer:ENSP00000431245.2Re-query CCDS DB by Nucleotide ID:ENST00000526355Re-query CCDS DB by Protein ID:ENSP00000431245
Original member Current member NCBI NM_000855.3 NP_000846.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000855.3Link to Protein Sequence:NP_000846.1Re-query CCDS DB by Nucleotide ID:NM_000855Re-query CCDS DB by Protein ID:NP_000846Link to BLAST:NP_000846.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000846.1 732 P33402-1 732 100% 0 0

Chromosomal Locations for CCDS 8335.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 106687549 106687756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106708512 106708666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106776439 106776582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106809993 106810478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106939460 106940178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106978619 106978740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106986070 106986131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107017753 107018055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2199 nt):
ATGTCTCGAAGGAAGATTTCGTCCGAGTCCTTCAGCTCCCTGGGCTCCGACTACCTGGAGACCAGCCCGG
AGGAGGAGGGGGAGTGCCCCCTGTCTAGGCTCTGCTGGAATGGCAGCCGGAGCCCGCCCGGGCCGCTGGA
GCCCAGCCCGGCCGCAGCTGCCGCTGCCGCCGCCCCGGCCCCGACCCCGGCTGCTTCTGCCGCCGCCGCC
GCTGCCACTGCCGGGGCCAGGAGGGTGCAGCGCCGGAGGCGGGTCAACCTGGACTCGCTGGGCGAGAGCA
TCAGCCGCCTGACGGCGCCCTCGCCTCAGACGATACAGCAGACTCTCAAGAGGACACTGCAGTATTATGA
ACATCAAGTTATTGGTTACAGGGATGCAGAAAAGAATTTCCACAATATCTCTAACAGATGCTCCTATGCA
GACCACTCCAACAAAGAAGAAATTGAAGATGTCTCAGGAATTCTTCAGTGTACTGCTAATATACTCGGTT
TGAAGTTTGAGGAAATTCAAAAAAGATTTGGTGAAGAGTTCTTTAATATATGCTTTCATGAGAATGAGAG
AGTCCTTCGAGCTGTAGGTGGCACTTTGCAGGACTTTTTTAACGGCTTTGATGCTTTGTTGGAACACATT
AGAACTTCTTTTGGAAAACAGGCCACTCTGGAGTCACCATCTTTCCTATGCAAAGAGCTCCCTGAAGGTA
CTCTCATGCTCCACTACTTCCACCCTCACCATATTGTGGGGTTTGCAATGCTGGGGATGATTAAGGCTGC
AGGAAAGAAGATCTATCGGCTGGATGTGGAAGTGGAACAGGTTGCAAATGAGAAGCTATGCTCTGATGTT
TCAAACCCAGGCAATTGTAGCTGTCTTACTTTCCTTATCAAAGAATGTGAAAATACTAATATCATGAAGA
ACCTTCCACAGGGAACCTCCCAAGTTCCTGCGGACCTCAGAATTAGCATCAACACCTTCTGTAGAGCCTT
CCCTTTCCACTTGATGTTTGATCCCAGCATGTCAGTCCTTCAGTTGGGGGAAGGTCTAAGGAAGCAGCTT
CGATGTGACACTCACAAAGTGCTCAAGTTTGAGGACTGCTTCGAGATTGTATCTCCAAAGGTTAATGCCA
CCTTTGAAAGGGTCCTGCTGCGACTGTCTACCCCGTTTGTGATTAGAACCAAGCCTGAGGCTTCTGGCTC
TGAAAATAAAGACAAGGTGATGGAAGTCAAAGGACAAATGATCCATGTTCCAGAATCAAATTCCATTTTA
TTTTTGGGCTCTCCATGTGTGGACAAGTTGGATGAACTCATGGGCCGAGGGCTACATCTCTCAGACATCC
CTATCCATGATGCCACCCGAGATGTCATTTTGGTTGGTGAGCAGGCAAAGGCCCAAGATGGGTTGAAGAA
AAGGATGGATAAATTAAAGGCAACTTTAGAAAGAACTCACCAGGCCCTGGAAGAAGAGAAAAAGAAGACA
GTGGATCTTCTATATTCTATTTTCCCTGGTGATGTAGCCCAGCAATTATGGCAAGGGCAGCAAGTACAGG
CCAGAAAGTTTGATGATGTCACCATGCTCTTTTCAGACATTGTTGGCTTCACAGCCATATGTGCCCAGTG
TACTCCCATGCAAGTAATCAGCATGCTGAATGAACTGTACACCAGATTTGACCACCAGTGTGGATTTTTG
GATATTTATAAGGTGGAAACAATAGGTGATGCCTACTGTGTTGCAGCAGGGCTCCACAGAAAAAGCCTCT
GCCATGCTAAACCCATTGCTCTGATGGCCTTGAAGATGATGGAACTTTCAGAAGAGGTGCTGACACCTGA
TGGAAGACCGATTCAGATGAGGATAGGAATTCACTCAGGCTCCGTGCTGGCTGGAGTTGTTGGGGTGCGA
ATGCCACGTTATTGCCTGTTTGGAAATAATGTCACACTGGCAAGCAAATTCGAGTCGGGAAGTCACCCTC
GGCGCATCAATGTCAGCCCAACCACTTACCAATTATTAAAACGAGAAGAAAGTTTCACATTCATTCCGCG
GTCTCGTGAAGAGCTTCCAGACAACTTTCCAAAGGAAATTCCTGGGATCTGCTATTTCCTGGAGGTAAGG
ACTGGTCCAAAGCCACCAAAGCCTTCTCTTTCTTCGTCGAGAATAAAAAAGGTTTCCTACAACATCGGCA
CCATGTTCCTCCGGGAGACAAGCCTCTGA

Translation (732 aa):
MSRRKISSESFSSLGSDYLETSPEEEGECPLSRLCWNGSRSPPGPLEPSPAAAAAAAAPAPTPAASAAAA
AATAGARRVQRRRRVNLDSLGESISRLTAPSPQTIQQTLKRTLQYYEHQVIGYRDAEKNFHNISNRCSYA
DHSNKEEIEDVSGILQCTANILGLKFEEIQKRFGEEFFNICFHENERVLRAVGGTLQDFFNGFDALLEHI
RTSFGKQATLESPSFLCKELPEGTLMLHYFHPHHIVGFAMLGMIKAAGKKIYRLDVEVEQVANEKLCSDV
SNPGNCSCLTFLIKECENTNIMKNLPQGTSQVPADLRISINTFCRAFPFHLMFDPSMSVLQLGEGLRKQL
RCDTHKVLKFEDCFEIVSPKVNATFERVLLRLSTPFVIRTKPEASGSENKDKVMEVKGQMIHVPESNSIL
FLGSPCVDKLDELMGRGLHLSDIPIHDATRDVILVGEQAKAQDGLKKRMDKLKATLERTHQALEEEKKKT
VDLLYSIFPGDVAQQLWQGQQVQARKFDDVTMLFSDIVGFTAICAQCTPMQVISMLNELYTRFDHQCGFL
DIYKVETIGDAYCVAAGLHRKSLCHAKPIALMALKMMELSEEVLTPDGRPIQMRIGIHSGSVLAGVVGVR
MPRYCLFGNNVTLASKFESGSHPRRINVSPTTYQLLKREESFTFIPRSREELPDNFPKEIPGICYFLEVR
TGPKPPKPSLSSSRIKKVSYNIGTMFLRETSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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