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Report for CCDS831.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
831.1 Public Homo sapiens 1 DENND2D 24 110 108 CCDS HistoryNCBI Gene:79961Re-query CCDS DB by CCDS ID:831.1Re-query CCDS DB by GeneID:79961See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 831.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357640.9 ENSP00000350266.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357640.9Link to Ensembl Protein Viewer:ENSP00000350266.4Re-query CCDS DB by Nucleotide ID:ENST00000357640Re-query CCDS DB by Protein ID:ENSP00000350266
Original member Current member NCBI NM_024901.5 NP_079177.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024901.5Link to Protein Sequence:NP_079177.2Re-query CCDS DB by Nucleotide ID:NM_024901Re-query CCDS DB by Protein ID:NP_079177Link to BLAST:NP_079177.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079177.2 471 Q9H6A0-1 471 100% 0 0

Chromosomal Locations for CCDS 831.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 111187605 111187681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111188131 111188370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111188702 111188786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111189212 111189253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111192140 111192317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111194578 111194726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111195916 111196056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111197176 111197253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111197920 111197989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111198630 111198742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111199623 111199798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111200393 111200459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGGAAGGACAAGTGGTAGGCCGGGTGTTCAGGCTCTTCCAACGCCGACTGCTTCAACTCCGAGCAGGAC
CACCCCAGGACAATTCAGGGGAAGCTTTAAAGGAACCAGAAAGGGCCCAGGAGCACTCTTTGCCCAACTT
TGCTGGGGGGCAGCACTTCTTTGAATACCTTCTTGTGGTTTCTCTCAAAAAGAAGCGTTCAGAGGATGAT
TACGAGCCTATAATCACCTACCAATTTCCCAAGCGGGAGAACCTGCTTCGGGGTCAGCAGGAGGAGGAGG
AGCGGCTGCTCAAAGCTATCCCCTTGTTCTGCTTCCCAGATGGGAATGAGTGGGCATCACTCACCGAGTA
TCCCAGGGAGACCTTCTCCTTCGTTCTGACCAATGTGGATGGGAGCAGAAAGATTGGATACTGCAGGCGC
CTCTTGCCTGCCGGCCCTGGCCCTCGCCTTCCCAAAGTGTACTGCATCATCAGCTGCATCGGCTGCTTCG
GCTTGTTCTCCAAGATCCTGGATGAAGTGGAGAAGAGACATCAGATCTCCATGGCTGTCATCTACCCGTT
CATGCAGGGCCTCCGAGAGGCAGCCTTCCCTGCTCCTGGGAAGACTGTCACTCTCAAGAGCTTCATCCCC
GACTCAGGCACTGAGTTCATTTCACTGACACGGCCCCTGGACTCCCACCTAGAACATGTGGATTTTAGTT
CTCTATTGCACTGTCTCAGTTTTGAACAGATACTTCAGATCTTTGCCTCTGCCGTGCTGGAGAGAAAAAT
CATCTTCCTGGCGGAAGGTCTCAGCACCTTGTCTCAGTGCATCCATGCTGCTGCCGCACTGCTCTACCCC
TTCAGCTGGGCGCACACCTACATCCCTGTTGTCCCTGAGAGCCTTCTGGCCACCGTCTGCTGCCCCACCC
CCTTCATGGTTGGAGTACAAATGCGCTTCCAGCAGGAGGTCATGGACAGCCCTATGGAAGAGGTCCTGCT
GGTCAATCTTTGTGAAGGAACCTTCTTAATGTCGGTTGGTGATGAAAAAGACATCCTGCCACCGAAGCTT
CAGGATGACATCTTAGACTCTCTTGGTCAGGGGATCAATGAGTTAAAGACTGCAGAACAAATCAACGAGC
ATGTTTCAGGCCCCTTTGTGCAGTTCTTTGTCAAGATTGTGGGCCATTATGCTTCCTATATCAAGCGGGA
GGCAAATGGGCAAGGCCACTTCCAAGAAAGATCCTTCTGTAAGGCTCTGACCTCCAAGACCAACCGCCGA
TTTGTGAAGAAGTTTGTGAAGACACAGCTCTTCTCACTTTTCATCCAGGAAGCCGAGAAGAGCAAGAATC
CTCCTGCAGGCTATTTCCAACAGAAAATACTTGAATATGAGGAACAGAAGAAACAGAAGAAACCAAGGGA
AAAAACTGTGAAATAA

Translation (471 aa):
MEGQVVGRVFRLFQRRLLQLRAGPPQDNSGEALKEPERAQEHSLPNFAGGQHFFEYLLVVSLKKKRSEDD
YEPIITYQFPKRENLLRGQQEEEERLLKAIPLFCFPDGNEWASLTEYPRETFSFVLTNVDGSRKIGYCRR
LLPAGPGPRLPKVYCIISCIGCFGLFSKILDEVEKRHQISMAVIYPFMQGLREAAFPAPGKTVTLKSFIP
DSGTEFISLTRPLDSHLEHVDFSSLLHCLSFEQILQIFASAVLERKIIFLAEGLSTLSQCIHAAAALLYP
FSWAHTYIPVVPESLLATVCCPTPFMVGVQMRFQQEVMDSPMEEVLLVNLCEGTFLMSVGDEKDILPPKL
QDDILDSLGQGINELKTAEQINEHVSGPFVQFFVKIVGHYASYIKREANGQGHFQERSFCKALTSKTNRR
FVKKFVKTQLFSLFIQEAEKSKNPPAGYFQQKILEYEEQKKQKKPREKTVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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