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Report for CCDS82916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82916.1 Public Homo sapiens 4 FAM114A1 24 110 108 CCDS HistoryNCBI Gene:92689Re-query CCDS DB by CCDS ID:82916.1Re-query CCDS DB by GeneID:92689See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000515037.5 ENSP00000424115.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000515037.5Link to Ensembl Protein Viewer:ENSP00000424115.1Re-query CCDS DB by Nucleotide ID:ENST00000515037Re-query CCDS DB by Protein ID:ENSP00000424115
Original member Current member NCBI NM_001330764.2 NP_001317693.1 Accepted alive Link to Nucleotide Sequence:NM_001330764.2Link to Protein Sequence:NP_001317693.1Re-query CCDS DB by Nucleotide ID:NM_001330764Re-query CCDS DB by Protein ID:NP_001317693Link to BLAST:NP_001317693.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317693.1 356 Q8IWE2-2 356 100% 0 0

Chromosomal Locations for CCDS 82916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 38905826 38905861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38908592 38908726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38914921 38915073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38922770 38922893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38929242 38929333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38931451 38931612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38932235 38932374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38935718 38935790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38940968 38941021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 38943456 38943557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1071 nt):
ATGCTGTCTGCCATCACCAATGTGGTTCAAAACACAGGTAAAAGTGTCTTAACTGGAGGCCTTGATGCGT
TGGAATTCATCGGCAAGAAAACCATGAATGTCCTTGCAGAAAGTGACCCGGGCTTTAAGCGGACCAAGAC
GCTCATGGAGAGAACTGTTTCCTTGTCTCAGATGTTAAGGGAAGCTAAGGAGAAGGAGAAGCAGAGACTG
GCACAGCAGCTCACGATGGAGAGAACCGCGCACTACGGGATGCTGTTTGATGAATATCAAGGCTTGTCAC
ACCTGGAAGCCCTGGAAATTCTGTCCAATGAAAGCGAAAGCAAGGTTCAGTCATTTTTAGCATCACTTGA
TGGAGAGAAGCTGGAACTCTTAAAAAATGACCTAATTTCCATTAAAGACATCTTTGCAGCCAAAGAATTA
GAGAATGAAGAAAATCAAGAAGAACAAGGCTTAGAAGAAAAGGGAGAAGAATTTGCTCGCATGCTTACAG
AGCTTCTCTTTGAATTACATGTGGCGGCCACACCTGACAAACTCAATAAGGCCATGAAGAGGGCTCATGA
CTGGGTGGAAGAGGATCAAACCGTGGTGTCAGTAGATGTGGCAAAAGTGTCCGAAGAAGAAACAAAGAAG
GAAGAAAAGGAAGAGAAATCTCAAGACCCTCAAGAAGACAAAAAGGAGGAAAAGAAAACTAAGACCATAG
AGGAAGTATACATGTCGTCCATTGAAAGTCTGGCGGAGGTAACAGCGCGCTGTATTGAGCAGCTTCATAA
AGTAGCAGAATTAATTCTTCATGGACAAGAAGAGGAAAAACCAGCTCAGGACCAAGCAAAAGTTCTAATA
AAATTAACTACTGCAATGTGCAATGAAGTGGCCTCTTTATCAAAGAAGTTTACGAATTCTTTAACCACTG
TTGGGAGCAACAAGAAGGCCGAGGTCCTTAACCCCATGATCAGTAGTGTATTGTTAGAGGGCTGCAACAG
TACAACGTACATACAGGATGCCTTCCAGCTGCTGCTGCCTGTTCTGCAGGTCTCACATATCCAGACCAGT
TGTTTGAAAGCACAGCCGTGA

Translation (356 aa):
MLSAITNVVQNTGKSVLTGGLDALEFIGKKTMNVLAESDPGFKRTKTLMERTVSLSQMLREAKEKEKQRL
AQQLTMERTAHYGMLFDEYQGLSHLEALEILSNESESKVQSFLASLDGEKLELLKNDLISIKDIFAAKEL
ENEENQEEQGLEEKGEEFARMLTELLFELHVAATPDKLNKAMKRAHDWVEEDQTVVSVDVAKVSEEETKK
EEKEEKSQDPQEDKKEEKKTKTIEEVYMSSIESLAEVTARCIEQLHKVAELILHGQEEEKPAQDQAKVLI
KLTTAMCNEVASLSKKFTNSLTTVGSNKKAEVLNPMISSVLLEGCNSTTYIQDAFQLLLPVLQVSHIQTS
CLKAQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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