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Report for CCDS82747.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82747.1 Public Homo sapiens 3 SLC4A7 24 110 108 CCDS HistoryNCBI Gene:9497Re-query CCDS DB by CCDS ID:82747.1Re-query CCDS DB by GeneID:9497See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82747.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454389.6 ENSP00000390394.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000454389.6Link to Ensembl Protein Viewer:ENSP00000390394.1Re-query CCDS DB by Nucleotide ID:ENST00000454389Re-query CCDS DB by Protein ID:ENSP00000390394
Original member Current member NCBI NM_001321103.2 NP_001308032.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321103.2Link to Protein Sequence:NP_001308032.1Re-query CCDS DB by Nucleotide ID:NM_001321103Re-query CCDS DB by Protein ID:NP_001308032Link to BLAST:NP_001308032.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308032.1 1259 Q9Y6M7-7 1259 100% 0 0

Chromosomal Locations for CCDS 82747.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 27376764 27376845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27379249 27379356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27383153 27383250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27385892 27386023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27389931 27390104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27391740 27391808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27394518 27394769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27394954 27395115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27397684 27397797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27398192 27398353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27400764 27400869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27403139 27403384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27404830 27404963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27409356 27409530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27411642 27411748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27418486 27418632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27420700 27420787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27421622 27421779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27424037 27424152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27431298 27431669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27433916 27434104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27436388 27436548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27437388 27437526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27448651 27448797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27452417 27452498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 27484067 27484126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3780 nt):
ATGGAGGCTGATGGGGCCGGCGAGCAGATGAGACCGCTACTCACCCGGGTAACGAGCAGGGGTCCTGATG
AAGAAGCTGTTGTGGATCTTGGCAAAACTAGCTCAACTGTGAACACCAAGTTTGAAAAAGAAGAACTAGA
AAGTCATAGAGCTGTATATATTGGTGTTCACGTCCCGTTTAGTAAAGAGAGTCGTCGGCGTCATAGGCAT
CGCGGACACAAACATCACCACCGGAGAAGAAAAGATAAAGAATCAGATAAAGAAGATGGACGGGAATCTC
CTTCTTATGATACACCATCCCAGAGAGTTCAGTTTATCCTTGGTACTGAAGATGATGATGAAGAACATAT
TCCCCATGATCTCTTCACGGAAATGGATGAACTGTGTTACAGAGATGGAGAAGAATATGAATGGAAAGAA
ACTGCTAGATGGCTGAAATTTGAAGAGGATGTTGAAGATGGCGGTGACCGATGGAGTAAACCTTATGTGG
CAACTCTCTCTTTGCACAGTCTTTTTGAACTAAGGAGTTGCATCCTCAATGGAACAGTCATGCTGGATAT
GAGAGCAAGCACTCTAGATGAAATAGCAGATATGGTATTAGACAACATGATAGCTTCTGGCCAATTAGAC
GAGTCCATACGAGAGAATGTCAGAGAAGCTCTTCTGAAGAGACATCATCATCAGAATGAGAAAAGATTCA
CCAGTCGGATTCCTCTTGTTCGATCTTTTGCAGATATAGGCAAGAAACATTCTGACCCTCACTTGCTTGA
AAGGAATGGGGAAGGCCTTTCAGCCTCCCGCCACTCTTTGCGAACAGGTCTGTCTGCCTCAAACCTTTCC
TTGAGAGGAGAATCACCTTTATCTCTTCTTCTTGGTCATCTTCTTCCTTCTTCAAGAGCTGGAACCCCTG
CAGGCTCAAGGTGTACAACCCCAGTACCCACCCCTCAAAACAGTCCTCCTTCTAGCCCTAGCATCAGCCG
CCTGACCTCCAGAAGTTCCCAAGAGAGTCAGCGTCAGGCCCCAGAACTACTGGTTTCACCTGCCAGTGAT
GATATTCCCACAGTAGTAATTCATCCGCCTGAGGAAGACTTAGAAGCAGCGCTGAAAGGCGAGGAGCAGA
AGAATGAGGAAAATGTTGACTTAACTCCAGGTATTTTGGCCTCTCCCCAGTCTGCTCCTGGAAACTTGGA
CAATAGTAAAAGTGGAGAAATTAAAGGTAATGGAAGTGGTGGAAGCAGAGAAAATAGTACTGTTGACTTC
AGCAAGGTTGATATGAATTTCATGAGAAAAATTCCTACGGGTGCTGAGGCATCCAACGTCCTGGTGGGCG
AAGTAGACTTTTTGGAAAGGCCAATAATTGCATTTGTGAGACTGGCTCCTGCTGTCCTCCTTACAGGGTT
GACTGAGGTCCCTGTTCCAACCAGGTTTTTGTTTTTGTTATTGGGTCCAGCGGGCAAGGCACCACAGTAC
CATGAAATTGGACGATCAATAGCCACTCTCATGACAGATGAGATTTTCCATGATGTAGCTTATAAAGCAA
AAGACAGAAATGACCTCTTATCTGGAATTGATGAATTTTTAGATCAAGTAACTGTCCTACCTCCAGGAGA
GTGGGATCCTTCTATACGCATAGAACCACCAAAAAGTGTCCCTTCTCAGGAAAAGAGAAAGATTCCTGTG
TTTCACAATGGATCTACCCCCACACTGGGTGAGACTCCTAAAGAGGCCGCTCATCATGCTGGGCCTGAGC
TACAGAGGACTGGACGGCTTTTTGGTGGTTTGATACTTGACATCAAAAGGAAAGCACCTTTTTTCTTGAG
TGACTTCAAGGATGCATTAAGCCTGCAGTGCCTGGCCTCGATTCTTTTCCTATACTGTGCCTGTATGTCT
CCTGTAATCACTTTTGGAGGGCTGCTTGGAGAAGCTACAGAAGGCAGAATAAGTGCAATAGAGTCTCTTT
TTGGAGCATCATTAACTGGGATTGCCTATTCATTGTTTGCTGGGCAACCTCTAACAATATTGGGGAGCAC
AGGTCCAGTTCTAGTGTTTGAAAAAATTTTATATAAATTCTGCAGAGATTATCAACTTTCTTATCTGTCT
TTAAGAACCAGTATTGGTCTGTGGACTTCTTTTTTGTGCATTGTTTTGGTTGCAACAGATGCAAGCAGCC
TTGTGTGTTATATTACTCGATTTACAGAAGAGGCTTTTGCAGCCCTTATTTGCATCATATTCATCTACGA
GGCTTTGGAGAAGCTCTTTGATTTAGGAGAAACATATGCATTTAATATGCACAACAACTTAGATAAACTG
ACCAGCTACTCATGTGTATGTACTGAACCTCCAAACCCCAGCAATGAAACTCTAGCACAATGGAAGAAAG
ATAATATAACAGCACACAATATTTCCTGGAGAAATCTTACTGTTTCTGAATGTAAAAAACTTCGTGGTGT
ATTCTTGGGGTCAGCTTGTGGTCATCATGGACCTTATATTCCAGATGTGCTCTTTTGGTGTGTCATCTTG
TTTTTCACAACATTTTTTCTGTCTTCATTCCTCAAGCAATTTAAGACCAAGCGTTACTTTCCTACCAAGG
TGCGATCGACAATCAGTGATTTTGCTGTATTTCTCACAATAGTAATAATGGTTACAATTGACTACCTTGT
AGGAGTTCCATCTCCTAAACTTCATGTTCCTGAAAAATTTGAGCCTACTCATCCAGAGAGAGGGTGGATC
ATAAGCCCACTGGGAGATAATCCTTGGTGGACCTTATTAATAGCTGCTATTCCTGCTTTGCTTTGTACCA
TTCTCATCTTTATGGATCAACAAATCACAGCTGTAATTATAAACAGAAAGGAACACAAATTGAAGAAAGG
AGCTGGCTATCACCTTGATTTGCTCATGGTTGGCGTTATGTTGGGAGTTTGCTCTGTCATGGGACTTCCA
TGGTTTGTGGCTGCAACAGTGTTGTCAATAAGTCATGTCAACAGCTTAAAAGTTGAATCTGAATGTTCTG
CTCCAGGGGAACAACCCAAGTTTTTGGGAATTCGTGAACAGCGGGTTACAGGGCTAATGATTTTTATTCT
AATGGGCCTCTCTGTGTTCATGACTTCAGTCCTAAAGTTTATTCCAATGCCTGTTCTGTATGGTGTTTTC
CTTTATATGGGAGTTTCCTCATTAAAAGGAATCCAGTTATTTGACCGTATAAAATTATTTGGAATGCCTG
CTAAGCATCAGCCTGATTTGATATACCTCCGTTATGTGCCGCTCTGGAAGGTCCATATTTTCACAGTCAT
TCAGCTTACTTGTTTGGTCCTTTTATGGGTGATAAAAGTTTCAGCTGCTGCAGTGGTTTTTCCCATGATG
GTTCTTGCATTAGTGTTTGTGCGCAAACTCATGGACCTGTGTTTCACGAAGAGAGAACTTAGTTGGCTTG
ATGATCTTATGCCAGAAAGTAAGAAAAAGAAAGAAGATGACAAAAAGAAAAAAGAGAAAGAGGAAGCTGA
ACGGATGCTTCAAGATGATGATGATACTGTGCACCTTCCATTTGAAGGGGGAAGTCTCTTGCAAATTCCA
GTCAAGGCCCTAAAATATAGTGTTGATCCCTCAATTGTTAACATATCAGATGAAATGGCCAAAACTGCAC
AGTGGAAGGCACTTTCCATGAATACTGAGAATGCCAAAGTAACCAGATCTAACATGAGTCCTGATAAACC
TGTGAGTGTGAAAATAAGTTTTGAAGATGAACCAAGAAAGAAATACGTGGATGCTGAAACTTCATTATAG

Translation (1259 aa):
MEADGAGEQMRPLLTRVTSRGPDEEAVVDLGKTSSTVNTKFEKEELESHRAVYIGVHVPFSKESRRRHRH
RGHKHHHRRRKDKESDKEDGRESPSYDTPSQRVQFILGTEDDDEEHIPHDLFTEMDELCYRDGEEYEWKE
TARWLKFEEDVEDGGDRWSKPYVATLSLHSLFELRSCILNGTVMLDMRASTLDEIADMVLDNMIASGQLD
ESIRENVREALLKRHHHQNEKRFTSRIPLVRSFADIGKKHSDPHLLERNGEGLSASRHSLRTGLSASNLS
LRGESPLSLLLGHLLPSSRAGTPAGSRCTTPVPTPQNSPPSSPSISRLTSRSSQESQRQAPELLVSPASD
DIPTVVIHPPEEDLEAALKGEEQKNEENVDLTPGILASPQSAPGNLDNSKSGEIKGNGSGGSRENSTVDF
SKVDMNFMRKIPTGAEASNVLVGEVDFLERPIIAFVRLAPAVLLTGLTEVPVPTRFLFLLLGPAGKAPQY
HEIGRSIATLMTDEIFHDVAYKAKDRNDLLSGIDEFLDQVTVLPPGEWDPSIRIEPPKSVPSQEKRKIPV
FHNGSTPTLGETPKEAAHHAGPELQRTGRLFGGLILDIKRKAPFFLSDFKDALSLQCLASILFLYCACMS
PVITFGGLLGEATEGRISAIESLFGASLTGIAYSLFAGQPLTILGSTGPVLVFEKILYKFCRDYQLSYLS
LRTSIGLWTSFLCIVLVATDASSLVCYITRFTEEAFAALICIIFIYEALEKLFDLGETYAFNMHNNLDKL
TSYSCVCTEPPNPSNETLAQWKKDNITAHNISWRNLTVSECKKLRGVFLGSACGHHGPYIPDVLFWCVIL
FFTTFFLSSFLKQFKTKRYFPTKVRSTISDFAVFLTIVIMVTIDYLVGVPSPKLHVPEKFEPTHPERGWI
ISPLGDNPWWTLLIAAIPALLCTILIFMDQQITAVIINRKEHKLKKGAGYHLDLLMVGVMLGVCSVMGLP
WFVAATVLSISHVNSLKVESECSAPGEQPKFLGIREQRVTGLMIFILMGLSVFMTSVLKFIPMPVLYGVF
LYMGVSSLKGIQLFDRIKLFGMPAKHQPDLIYLRYVPLWKVHIFTVIQLTCLVLLWVIKVSAAAVVFPMM
VLALVFVRKLMDLCFTKRELSWLDDLMPESKKKKEDDKKKKEKEEAERMLQDDDDTVHLPFEGGSLLQIP
VKALKYSVDPSIVNISDEMAKTAQWKALSMNTENAKVTRSNMSPDKPVSVKISFEDEPRKKYVDAETSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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