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Report for CCDS82545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82545.1 Public Homo sapiens 2 NAB1 24 110 108 CCDS HistoryNCBI Gene:4664Re-query CCDS DB by CCDS ID:82545.1Re-query CCDS DB by GeneID:4664See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82545.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409641.5 ENSP00000386682.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409641.5Link to Ensembl Protein Viewer:ENSP00000386682.1Re-query CCDS DB by Nucleotide ID:ENST00000409641Re-query CCDS DB by Protein ID:ENSP00000386682
Original member Current member NCBI NM_001321314.1 NP_001308243.1 Accepted alive Link to Nucleotide Sequence:NM_001321314.1Link to Protein Sequence:NP_001308243.1Re-query CCDS DB by Nucleotide ID:NM_001321314Re-query CCDS DB by Protein ID:NP_001308243Link to BLAST:NP_001308243.1

Chromosomal Locations for CCDS 82545.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 190659177 190659995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190670326 190670459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190673101 190673152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190683738 190683827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190685479 190685638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190687201 190687317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190690245 190690333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGGCTGCGGCCTTACCCAGGACCCTGGGGGAGTTGCAGCTGTATAGAATATTACAAAAAGCCAATCTAC
TTTCTTATTTTGATGCCTTTATCCAACAAGGTGGTGATGATGTCCAGCAACTCTGTGAAGCAGGAGAAGA
GGAGTTTTTGGAAATCATGGCACTCGTGGGCATGGCTAGCAAGCCCCTTCATGTTAGAAGGCTGCAGAAG
GCTTTGAGAGACTGGGTCACAAACCCTGGGCTTTTCAATCAGCCACTGACTTCCCTTCCTGTCAGTAGCA
TACCCATCTATAAATTACCAGAGGGATCACCAACATGGCTGGGAATATCCTGCAGTAGTTATGAAAGGAG
TAGCAATGCCCGGGAACCTCATTTAAAAATCCCCAAATGTGCTGCCACCACCTGTGTGCAGAGCTTGGGA
CAGGGGAAGTCAGATGTGGTTGGGAGCCTAGCACTGCAGAGTGTTGGTGAGTCCAGACTCTGGCAAGGCC
ACCATGCCACTGAGAGCGAGCACAGCCTCTCCCCAGCAGACCTGGGCTCCCCCGCGTCCCCAAAGGAGAG
CAGTGAGGCGCTGGATGCTGCTGCTGCGCTCTCTGTGGCTGAGTGTGTGGAGCGGATGGCCCCCACACTG
CCAAAAAGTGACTTGAATGAAGTGAAAGAGCTGCTAAAAACCAACAAGAAGTTGGCCAAAATGATTGGTC
ACATCTTTGAGATGAACGATGATGATCCACACAAAGAGGAGGAAATTCGGAAATACAGTGCAATATATGG
CAGATTTGACTCAAAGAGGAAGGATGGGAAACATCTCACACTTCATGAGCTCACTGTTAATGAAGCGGCT
GCTCAACTCTGTGTGAAGGATAATGCCCTGCTGACAAGAAGAGATGAGCTTTTTGCCTTGGCTCGACAGA
TTTCTCGAGAAGTCACCTATAAATATACTTACAGAACCACCAAGTCAAAATGTGGAGAAAGAGATGAATT
ATCCCCAAAGAGAATTAAAGTGGAGGATGGGTTTCCAGATTTCCAGGATTCTGTGCAAACACTCTTCCAG
CAGGCTAGAGCTAAGAGTGAAGAACTTGCAGCTCTTAGTTCACAGCCTGAAAAGGTGATGGCAAAGCAGA
TGGAGTTCCTTTGCAACCAAGCTGGCTATGAGAGACTGCAGCATGCCGAGAGGAGGTTGTCTGCAGGGCT
TTACAGGCAGAGCTCAGAAGAGCACAGTCCTAACGGCTTGACTTCCGATAACTCAGATGGACAAGGAGAA
AGACCTTTGAATCTCCGAATGCCTAATTTACAGAACAGACAACCCCATCATTTTGTGGTGGATGGGGAGC
TGAGCAGACTTTACCCCAGTGAGGCAAAGTCCCACTCATCAGAGAGCCTTGGGATTTTAAAAGACTACCC
TCATTCAGCTTTTACCTTAGAAAAGAAAGTCATCAAAACAGAGCCTGAAGATTCAAGATAG

Translation (486 aa):
MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQK
ALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLG
QGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTL
PKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAA
AQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQ
QARAKSEELAALSSQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQGE
RPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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