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Report for CCDS82351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82351.1 Public Homo sapiens 19 HNRNPUL1 24 110 108 CCDS HistoryNCBI Gene:11100Re-query CCDS DB by CCDS ID:82351.1Re-query CCDS DB by GeneID:11100See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82351.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263367.7 ENSP00000263367.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000263367.7Link to Ensembl Protein Viewer:ENSP00000263367.3Re-query CCDS DB by Nucleotide ID:ENST00000263367Re-query CCDS DB by Protein ID:ENSP00000263367
Original member Current member NCBI NM_001301016.3 NP_001287945.1 Accepted alive Link to Nucleotide Sequence:NM_001301016.3Link to Protein Sequence:NP_001287945.1Re-query CCDS DB by Nucleotide ID:NM_001301016Re-query CCDS DB by Protein ID:NP_001287945Link to BLAST:NP_001287945.1

Chromosomal Locations for CCDS 82351.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 41265316 41265343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41268223 41268345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41272082 41272235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41273982 41274055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41276159 41276298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41279077 41279176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41281163 41281275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41292245 41292511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41294338 41294460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41294558 41294686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41301536 41301704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41302665 41302949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41303972 41304261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41305676 41305867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41306449 41306565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGCGATCCTGGGCGTTCTCCTATTTGGATGCCATGGACAATATTACCAGGCAGAACCAATTCTACGATA
CCCAAGTCATCAAACAAGAAAACGAGTCAGGCTACGAGAGGAGACCACTGGAAATGGAGCAGCAGCAGGC
CTATCGTCCAGAAATGAAGACAGAGATGAAGCAAGGAGCACCCACCAGCTTCCTCCCGCCTGAAGCTTCT
CAACTCAAGCCAGACAGGCAGCAATTCCAGAGTCGAAAGAGGCCTTATGAAGAAAACCGGGGACGGGGGT
ACTTTGAGCACCGAGAGGATAGGAGGGGCCGCTCTCCTCAGCCTCCTGCTGAAGAGGATGAAGATGACTT
TGATGATACCCTTGTTGCTATTGACACCTATAACTGCGACCTCCACTTCAAGGTGGCCCGAGATCGGAGT
AGTGGCTATCCGCTCACAATTGAGGGCTTTGCATACCTGTGGTCAGGAGCCCGTGCCAGCTATGGGGTCA
GAAGGGGCCGTGTATGCTTCGAGATGAAGATCAATGAGGAAATCTCCGTGAAGCACCTTCCGTCTACAGA
GCCTGACCCCCACGTGGTCCGTATCGGCTGGTCCCTGGACTCCTGCAGCACCCAGCTAGGCGAAGAGCCT
TTCTCCTATGGCTATGGAGGCACTGGGAAGAAGTCCACCAATAGCCGGTTTGAAAACTACGGAGACAAGT
TTGCAGAGAACGATGTGATTGGCTGCTTTGCGGATTTTGAATGTGGAAATGACGTGGAACTGTCTTTTAC
CAAGAATGGAAAGTGGATGGGCATTGCTTTCCGAATCCAGAAGGAAGCCTTGGGGGGTCAGGCCCTCTAT
CCTCATGTCCTGGTGAAGAATTGCGCAGTGGAGTTCAACTTCGGACAGAGAGCAGAGCCCTACTGTTCTG
TCCTCCCGGGGTTTACCTTCATCCAGCACCTTCCCCTTAGTGAGCGTATCCGGGGCACCGTTGGACCAAA
GAGCAAGGCAGAATGTGAGATTCTGATGATGGTGGGCCTGCCTGCTGCTGGCAAGACCACATGGGCCATC
AAACATGCAGCCTCCAACCCTTCCAAGAAGTACAACATCCTGGGTACCAATGCCATCATGGATAAGATGC
GGGTGATGGGCCTACGCCGGCAGCGGAACTATGCTGGCCGCTGGGATGTCCTGATCCAGCAGGCCACCCA
GTGCCTCAACCGCCTCATCCAGATTGCTGCCCGCAAGAAACGCAACTATATCCTAGATCAGACAAATGTT
TATGGGTCAGCCCAGAGACGAAAAATGAGACCATTTGAAGGCTTCCAGCGCAAAGCTATTGTAATTTGTC
CCACTGACGAGGACCTAAAAGACCGAACAATAAAGCGAACCGACGAGGAAGGGAAGGATGTCCCAGATCA
TGCGGTCTTAGAAATGAAAGCCAACTTCACGTTGCCAGATGTTGGGGACTTCCTGGATGAGGTTCTGTTC
ATTGAGCTGCAGCGGGAGGAAGCGGACAAGCTAGTGAGGCAGTACAACGAGGAAGGCCGCAAGGCTGGGC
CACCCCCTGAAAAGCGCTTTGACAACCGAGGTGGTGGTGGCTTCCGGGGCCGCGGGGGTGGTGGTGGCTT
CCAGCGCTATGAAAACCGAGGACCCCCTGGAGGCAACCGTGGCGGCTTCCAGAACCGAGGGGGAGGCAGC
GGTGGAGGAGGCAACTACCGAGGAGGTTTCAACCGCAGCGGAGGTGGTGGCTATAGCCAGAACCGCTGGG
GTAACAACAACCGGGATAACAACAACTCCAACAACAGAGGCAGCTACAACCGGGCTCCCCAGCAACAGCC
GCCACCACAGCAGCCTCCGCCACCACAGCCACCACCCCAGCAGCCACCGCCACCACCCAGCTACAGCCCT
GCTCGGAACCCCCCAGGGGCCAGCACCTACAATAAGAACAGCAACATCCCTGGCTCAAGCGCCAATACCA
GCACCCCCACCGTCAGCAGCTACAGCCCTCCACAGCCGAGTTACAGCCAGCCACCCTACAACCAGGGAGG
TTACAGCCAGGGCTACACAGCCCCACCGCCTCCACCTCCACCACCACCTGCCTACAACTATGGGAGCTAC
GGCGGTTACAACCCGGCCCCCTATACCCCACCGCCACCCCCCACTGCACAGACCTACCCTCAGCCCAGCT
ATAACCAGTATCAGCAGTATGCCCAGCAGTGGAACCAGTACTATCAGAACCAGGGCCAGTGGCCGCCATA
CTACGGGAACTACGACTACGGGAGCTACTCCGGGAACACACAGGGTGGCACAAGTACACAGTAG

Translation (767 aa):
MRSWAFSYLDAMDNITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEAS
QLKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFKVARDRS
SGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEP
FSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALY
PHVLVKNCAVEFNFGQRAEPYCSVLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAI
KHAASNPSKKYNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNV
YGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFTLPDVGDFLDEVLF
IELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQNRGGGS
GGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSP
ARNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSY
GGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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