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Report for CCDS82193.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82193.1 Public Homo sapiens 17 WIPI1 24 110 108 CCDS HistoryNCBI Gene:55062Re-query CCDS DB by CCDS ID:82193.1Re-query CCDS DB by GeneID:55062See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82193.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546360.5 ENSP00000437345.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546360.5Link to Ensembl Protein Viewer:ENSP00000437345.1Re-query CCDS DB by Nucleotide ID:ENST00000546360Re-query CCDS DB by Protein ID:ENSP00000437345
Original member Current member NCBI NM_001320772.2 NP_001307701.1 Accepted alive Link to Nucleotide Sequence:NM_001320772.2Link to Protein Sequence:NP_001307701.1Re-query CCDS DB by Nucleotide ID:NM_001320772Re-query CCDS DB by Protein ID:NP_001307701Link to BLAST:NP_001307701.1

Chromosomal Locations for CCDS 82193.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 68421773 68421820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68426075 68426175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68427135 68427253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68428829 68428936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68429996 68430160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68433468 68433575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68434556 68434626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68435620 68435712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68436382 68436479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68444493 68444589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 68450728 68450814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGAACGTGTATCACTTCAAGAAAGGCACAGAGATCTGTAATTACAGCTACTCCAGCAACATCTTGTCCA
TAAGGCTGAACCGGCAAAGGCTGCTGGTTTGCCTAGAAGAGTCCATTTATATTCACAACATTAAAGACAT
GAAGCTGTTGAAGACCCTCCTGGATATTCCTGCAAACCCAACAGGTCTATGTGCTCTCTCTATCAACCAT
TCCAATTCTTACCTGGCCTATCCTGGAAGCCTGACTTCAGGGGAGATTGTGCTTTATGATGGAAACTCCC
TGAAAACAGTCTGCACTATTGCTGCCCATGAGGGAACACTAGCTGCCATCACCTTCAATGCCTCAGGCTC
CAAACTAGCAAGTGCGTCTGAAAAAGGCACAGTCATCCGGGTGTTCTCTGTCCCTGATGGGCAAAAGCTC
TATGAGTTCCGGAGAGGGATGAAAAGGTATGTGACAATCAGCTCTCTAGTGTTCAGTATGGATTCACAAT
TCCTCTGCGCCTCCAGTAACACCGAGACGGTACACATCTTCAAGCTGGAACAGGTCACCAACAGTCGACC
AGAAGAGCCTTCGACCTGGAGTGGCTACATGGGAAAGATGTTTATGGCTGCTACCAACTACCTCCCTACC
CAGGTGTCAGACATGATGCATCAGGACAGGGCTTTTGCCACTGCACGCTTGAACTTCTCCGGACAGAGGA
ACATCTGTACCCTCTCAACGATCCAGAAGTTGCCACGGCTGCTAGTTGCGTCATCCAGTGGACACCTTTA
TATGTACAATTTGGATCCTCAGGATGGAGGAGAGTGTGTCTTAATCAAAACCCACAGCTTGCTTGGCTCA
GGAACAACAGAAGAGAATAAAGAAAATGACCTCAGACCTTCCTTACCTCAGTCTTATGCAGCGACCGTAG
CCAGACCAAGTGCATCTTCAGCCTCCACGGTGCCAGGTTATTCTGAGGACGGCGGGGCGCTGCGAGGAGA
AGTTATTCCTGAACATGAGTTTGCGACGGGACCAGTGTGTCTTGATGATGAGAATGAGTTTCCTCCTATA
ATCTTGTGCCGTGGAAATCAGAAGGGCAAAACGAAGCAGTCATGA

Translation (364 aa):
MNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEESIYIHNIKDMKLLKTLLDIPANPTGLCALSINH
SNSYLAYPGSLTSGEIVLYDGNSLKTVCTIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKL
YEFRRGMKRYVTISSLVFSMDSQFLCASSNTETVHIFKLEQVTNSRPEEPSTWSGYMGKMFMAATNYLPT
QVSDMMHQDRAFATARLNFSGQRNICTLSTIQKLPRLLVASSSGHLYMYNLDPQDGGECVLIKTHSLLGS
GTTEENKENDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGPVCLDDENEFPPI
ILCRGNQKGKTKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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