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Report for CCDS82148.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82148.1 Public Homo sapiens 17 GOSR2 24 110 108 CCDS HistoryNCBI Gene:9570Re-query CCDS DB by CCDS ID:82148.1Re-query CCDS DB by GeneID:9570See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82148.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000640608.1 ENSP00000491979.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640608.1Link to Ensembl Protein Viewer:ENSP00000491979.1Re-query CCDS DB by Nucleotide ID:ENST00000640608Re-query CCDS DB by Protein ID:ENSP00000491979
Original member Current member NCBI NM_001330252.2 NP_001317181.1 Accepted alive Link to Nucleotide Sequence:NM_001330252.2Link to Protein Sequence:NP_001317181.1Re-query CCDS DB by Nucleotide ID:NM_001330252Re-query CCDS DB by Protein ID:NP_001317181Link to BLAST:NP_001317181.1

Chromosomal Locations for CCDS 82148.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46923193 46923221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46929520 46929584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46931099 46931207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46932067 46932199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46938599 46938760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGGATCCCCTGTTCCAGCAAACGCACAAGCAGGTCCACGAGATCCAGTCTTGCATGGGACGCCTGGAGA
CGGCAGACAAGCAGTCTGTGCACATAGTAGAAAACGAAATCCAAGCAAGCATAGACCAGATATTCAGCCG
TCTAGAACGTCTGGAGATTTTGTCCAGCAAGGAGCCCCCTAACAAAAGGCAAAATGCCAGACTTCGGGTT
GACCAGTTAAAGTATGATGTCCAGCACCTGCAGACTGCGCTCAGAAACTTCCAGCATCGGCGCCATGCAA
GGGAGCAGCAGGAGAGACAGCGAGAAGAGCTTCTGTCTCGAACCTTCACCACTAACGGGACTCAGAAGAA
GATCCTTGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCATCGAGAAGCGGGCTTTC
CAGGACAAGTACTTTATGATAGGTGGGATGCTGCTGACCTGTGTGGTCATGTTCCTCGTGGTGCAGTACC
TGACATGA

Translation (165 aa):
MDPLFQQTHKQVHEIQSCMGRLETADKQSVHIVENEIQASIDQIFSRLERLEILSSKEPPNKRQNARLRV
DQLKYDVQHLQTALRNFQHRRHAREQQERQREELLSRTFTTNGTQKKILDIANMLGLSNTVMRLIEKRAF
QDKYFMIGGMLLTCVVMFLVVQYLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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