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Report for CCDS81967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81967.1 Public Homo sapiens 16 TLCD3B 24 110 108 CCDS HistoryNCBI Gene:83723Re-query CCDS DB by CCDS ID:81967.1Re-query CCDS DB by GeneID:83723See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279389.8 ENSP00000279389.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000279389.8Link to Ensembl Protein Viewer:ENSP00000279389.4Re-query CCDS DB by Nucleotide ID:ENST00000279389Re-query CCDS DB by Protein ID:ENSP00000279389
Original member Current member NCBI NM_001318504.2 NP_001305433.1 Accepted alive Link to Nucleotide Sequence:NM_001318504.2Link to Protein Sequence:NP_001305433.1Re-query CCDS DB by Nucleotide ID:NM_001318504Re-query CCDS DB by Protein ID:NP_001305433Link to BLAST:NP_001305433.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305433.1 224 Q71RH2-2 224 100% 0 0

Chromosomal Locations for CCDS 81967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30025183 30025467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30025726 30025821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30026609 30026843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30029432 30029490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGGCCTCCACTGCCGGCTACATCGTCTCCACCTCCTGCAAGCACATCATTGATGACCAACACTGGCTGT
CCTCTGCCTACACGCAATTTGCTGTGCCCTACTTCATCTACGACATCTACGCCATGTTCCTCTGTCACTG
GCACAAGCACCAGGTCAAAGGGCATGGAGGGGACGACGGAGCGGCCAGAGCCCCGGGCAGCACGTGGGCC
ATAGCGCGTGGCTACCTGCACAAGGAGTTCCTCATGGTGCTCCACCATGCCGCCATGGTGCTGGTGTGCT
TCCCACTCTCAGTGGTGTGGCGACAGGGTAAGGGAGACTTCTTTCTGGGTTGCATGTTGATGGCAGAGGT
CAGCACGCCCTTCGTCTGCCTTGGCAAGATCCTCATCCAGTACAAGCAGCAGCACACACTGCTGCACAAG
GTGAACGGGGCCCTGATGCTGCTCAGCTTCCTCTGCTGCCGGGTGCTGCTCTTTCCCTACCTGTACTGGG
CCTACGGGCGCCATGCCGGCCTGCCCCTGCTGGCCGTGCCCCTGGCCATCCCTGCCCACGTCAACCTGGG
CGCTGCGCTGCTCCTGGCCCCTCAGCTCTACTGGTTCTTCCTCATCTGCCGTGGGGCCTGCCGCCTCTTC
TGGCCCCGCTCCCGGCCGCCCCCGGCCTGCCAGGCCCAGGACTGA

Translation (224 aa):
MASTAGYIVSTSCKHIIDDQHWLSSAYTQFAVPYFIYDIYAMFLCHWHKHQVKGHGGDDGAARAPGSTWA
IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQYKQQHTLLHK
VNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAALLLAPQLYWFFLICRGACRLF
WPRSRPPPACQAQD


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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