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Report for CCDS81827.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81827.1 Public Homo sapiens 14 FCF1 24 110 108 CCDS HistoryNCBI Gene:51077Re-query CCDS DB by CCDS ID:81827.1Re-query CCDS DB by GeneID:51077See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81827.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000534938.6 ENSP00000444939.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534938.6Link to Ensembl Protein Viewer:ENSP00000444939.2Re-query CCDS DB by Nucleotide ID:ENST00000534938Re-query CCDS DB by Protein ID:ENSP00000444939
Original member Current member NCBI NM_001318508.2 NP_001305437.1 Accepted alive Link to Nucleotide Sequence:NM_001318508.2Link to Protein Sequence:NP_001305437.1Re-query CCDS DB by Nucleotide ID:NM_001318508Re-query CCDS DB by Protein ID:NP_001305437Link to BLAST:NP_001305437.1

Chromosomal Locations for CCDS 81827.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 74713518 74713552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74714872 74714943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74715951 74716099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74723272 74723344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74732731 74732818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74734076 74734170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74734882 74734930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (561 nt):
ATGAAGCGAATGCTTAGTCTCAGAGATCAGAGGCTTAAAGAAAAGGATAGATTAAAACCTAAAAAGAAAG
AAAAGAAGGATCCCAGCGCATTAAAGGAAAGAGAAGTTCCCCAACACCCTTCCTGCTTATTTTTCCAATA
TAATACACAGCTGGGCCCACCTTACCACATCCTCGTTGATACCAACTTTATCAACTTTTCCATAAAAGCC
AAACTGGACTTAGTGCAGTCAATGATGGACTGTCTGTATGCCAAGTGTATCCCATGTATAACCGATTGTG
TAATGGCTGAAATTGAGAAATTGGGGCAGAAGTATCGAGTGGCTCTAAGGATTGCCAAGGATCCAAGATT
TGAACGATTACCATGTACACACAAAGGAACCTATGCAGATGACTGCTTAGTACAGAGAGTAACTCAGCAT
AAGTGTTACATTGTGGCCACAGTTGACCGGGACCTGAAAAGAAGAATCCGTAAGATTCCTGGAGTTCCTA
TCATGTACATTTCTAACCATAGATACAACATTGAACGGATGCCAGATGATTATGGAGCCCCTCGATTCTA
A

Translation (186 aa):
MKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKA
KLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQH
KCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDYGAPRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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