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Report for CCDS81767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81767.1 Public Homo sapiens 13 FAM124A 24 110 108 CCDS HistoryNCBI Gene:220108Re-query CCDS DB by CCDS ID:81767.1Re-query CCDS DB by GeneID:220108See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81767.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615498.4 ENSP00000481212.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615498.4Link to Ensembl Protein Viewer:ENSP00000481212.1Re-query CCDS DB by Nucleotide ID:ENST00000615498Re-query CCDS DB by Protein ID:ENSP00000481212
Original member Current member NCBI NM_001330522.2 NP_001317451.1 Accepted alive Link to Nucleotide Sequence:NM_001330522.2Link to Protein Sequence:NP_001317451.1Re-query CCDS DB by Nucleotide ID:NM_001330522Re-query CCDS DB by Protein ID:NP_001317451Link to BLAST:NP_001317451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317451.1 301 Q86V42-3 301 100% 0 0

Chromosomal Locations for CCDS 81767.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51222502 51222569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51231348 51231379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51251468 51252273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGGACCCAAAGGCGGGCGGCGGCGGCGAGGAGGACGACTGCGTGGACTCGGGCGCCGAGACCGGAGGGT
CCGACTACAGCCACCTGTCCTCCACGAGCAGTGAGCTTTCCGTTGAAGAGGCGCAGGACCCTTTCCTGGT
CAGCATCCACATAATCGCAGACCCAGGGGAGTCCCAGCCCCTGCAGGAGGCCATCGACAACGTCCTGGCG
TGGATCCACCCCGACCTCCCGCTGTTCCGGGTGTCCGAGAGGCGGGCGTCCCGGCGGCGGCGGAAGCCCC
CCAAGGGCGCTCAGCCAGCGCTGGCTGTGGTGCTGTTCCTGCAGGAGGAGTACGGCGAAGAGCAGATCCT
GCAGCTGCACCGCACACTGCAGCAGCCGCCCTGGCGCCACCACCACACCGAGCAGGTGCACGGCCGGTTC
CTGCCCTACCTGCCCTGCAGCCAGGACTTCTTCACGCTGGCCCCTGGGACGCCGCTTTGGGCCATCCGGC
CCGTGCACTACGGCAAGGAAATCGTGCGCTTCACCGTCTACTGTCGCTACGACAACTATGCTGACAGCCT
CAGGTTCTACCAGCTGATTCTCCGGAGGAGCCCCAGCCAGAAGAAAGCGGACTTCTGCATCTTCCCTATT
TTTTCCAACCTGGATGTGGACATCCAGTTCTCCCTGAAAAGACTGCCCTGTGACCAGTGCCCGGTGCCCA
CCGACTCCTCCGTGCTGGAGTTCCGAGTGAGGGACATAGGCGAGCTCGTGCCTCTCCTGCCCAACCCTTG
CAGCCCCATCAGCGAGGGGCGCTGGCAGACGGAGGACCATGATGGGAACAAGATCCTCCTACAGGTACTG
GGGGGACGCCTGTCTGTCTGTTTAGGGGACCTGAGAAACCAGTTAGCTTTGCCTCAAACACTATAG

Translation (301 aa):
MDPKAGGGGEEDDCVDSGAETGGSDYSHLSSTSSELSVEEAQDPFLVSIHIIADPGESQPLQEAIDNVLA
WIHPDLPLFRVSERRASRRRRKPPKGAQPALAVVLFLQEEYGEEQILQLHRTLQQPPWRHHHTEQVHGRF
LPYLPCSQDFFTLAPGTPLWAIRPVHYGKEIVRFTVYCRYDNYADSLRFYQLILRRSPSQKKADFCIFPI
FSNLDVDIQFSLKRLPCDQCPVPTDSSVLEFRVRDIGELVPLLPNPCSPISEGRWQTEDHDGNKILLQVL
GGRLSVCLGDLRNQLALPQTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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