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Report for CCDS81667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81667.1 Public Homo sapiens 12 SMIM10L1 24 110 108 CCDS HistoryNCBI Gene:100129361Re-query CCDS DB by CCDS ID:81667.1Re-query CCDS DB by GeneID:100129361See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81667.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000622602.2 ENSP00000488907.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000622602.2Link to Ensembl Protein Viewer:ENSP00000488907.1Re-query CCDS DB by Nucleotide ID:ENST00000622602Re-query CCDS DB by Protein ID:ENSP00000488907
Original member Current member NCBI NM_001271592.2 NP_001258521.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001271592.2Link to Protein Sequence:NP_001258521.1Re-query CCDS DB by Nucleotide ID:NM_001271592Re-query CCDS DB by Protein ID:NP_001258521Link to BLAST:NP_001258521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258521.1 68 P0DMW3 68 100% 0 0

Chromosomal Locations for CCDS 81667.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 11171357 11171563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (207 nt):
ATGGCCCCCGCGGCGGCTCCGTCCTCCTTGGCCGTCAGGGCCTCAAGCCCCGCCGCGACACCCACCTCGT
ACGGCGTCTTCTGCAAGGGGCTCTCCCGCACCCTGCTCGCCTTCTTCGAGCTGGCCTGGCAGCTGCGCAT
GAACTTCCCGTACTTCTACGTCGCGGGCTCGGTGATCCTCAACATCCGATTGCAGGTACATATTTAG

Translation (68 aa):
MAPAAAPSSLAVRASSPAATPTSYGVFCKGLSRTLLAFFELAWQLRMNFPYFYVAGSVILNIRLQVHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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