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Report for CCDS81519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81519.1 Public Homo sapiens 10 LHPP 24 110 108 CCDS HistoryNCBI Gene:64077Re-query CCDS DB by CCDS ID:81519.1Re-query CCDS DB by GeneID:64077See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392757.8 ENSP00000376512.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392757.8Link to Ensembl Protein Viewer:ENSP00000376512.4Re-query CCDS DB by Nucleotide ID:ENST00000392757Re-query CCDS DB by Protein ID:ENSP00000376512
Original member Current member NCBI NM_001318332.2 NP_001305261.1 Accepted alive Link to Nucleotide Sequence:NM_001318332.2Link to Protein Sequence:NP_001305261.1Re-query CCDS DB by Nucleotide ID:NM_001318332Re-query CCDS DB by Protein ID:NP_001305261Link to BLAST:NP_001305261.1

Chromosomal Locations for CCDS 81519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 124461863 124461987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124484139 124484326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124488422 124488575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124496961 124497024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124498036 124498128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124498328 124498342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGGCACCGTGGGGCAAGCGGCTGGCTGGCGTGCGCGGGGTGCTGCTTGACATCTCGGGCGTGCTGTACG
ACAGCGGCGCGGGCGGCGGCACGGCCATCGCCGGCTCGGTGGAGGCGGTGGCCAGACTGAAGCGTTCCCG
GCTGAAGGTGAGGTTCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGGGGCAGCTTCAGAGG
CTGGGATTTGACATCTCTGAGCAGGAGGTGACCGCCCCGGCACCAGCTGCCTGCCAGATCCTGAAGGAGC
AAGGCCTGCGACCATACCTGCTCATCCATGACGGAGTCCGCTCAGAATTTGATCAGATCGACACATCCAA
CCCAAACTGTGTGGTAATTGCAGACGCAGGAGAAAGCTTTTCTTATCAAAACATGAATAACGCCTTCCAG
GTGCTCATGGAGCTGGAAAAACCTGTGCTCATATCACTGGGAAAAGGGCGTTACTACAAGGAGACCTCTG
GCCTGATGCTGGACGTTGGTCCCTACATGAAGGCGCTTGAGTATGCCTGTGGCATCAAAGCCGAGGTGGT
GGGGAAGCCTTCTCCTGAGTTTTTCAAGTCTGCCCTGCAAGCGATAGGAGTGGAAGCCCACCAGTTACTT
TCAGTATGA

Translation (212 aa):
MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQR
LGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQ
VLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQLL
SV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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