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Report for CCDS81425.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81425.1 Public Homo sapiens 1 MTARC2 24 110 108 CCDS HistoryNCBI Gene:54996Re-query CCDS DB by CCDS ID:81425.1Re-query CCDS DB by GeneID:54996See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81425.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359316.6 ENSP00000352266.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359316.6Link to Ensembl Protein Viewer:ENSP00000352266.2Re-query CCDS DB by Nucleotide ID:ENST00000359316Re-query CCDS DB by Protein ID:ENSP00000352266
Original member Current member NCBI NM_001331042.2 NP_001317971.1 Accepted alive Link to Nucleotide Sequence:NM_001331042.2Link to Protein Sequence:NP_001317971.1Re-query CCDS DB by Nucleotide ID:NM_001331042Re-query CCDS DB by Protein ID:NP_001317971Link to BLAST:NP_001317971.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317971.1 257 Q969Z3-2 257 100% 0 0

Chromosomal Locations for CCDS 81425.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 220748532 220748803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220754947 220755120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220761658 220761820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220762910 220763050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 220783919 220783942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGGCGCTTCCAGCTCCTCCGCGCTGGCCCGCCTCGGCCTCCCAGCCCGGCCCTGGCCCAGGTGGCTCG
GGGTCGCCGCGCTAGGACTGGCCGCCGTGGCCCTGGGGACTGTCGCCTGGCGCCGCGCATGGCCCAGGCG
GCGCCGGCGGCTGCAGCAGGTGGGCACCGTGGCGAAGCTCTGGATCTACCCGGTGAAATCCTGCAAAGGG
GTGCCGGTGAGCGAGGCTGAGTGCACGGCCATGGGGCTGCGCAGCGGCAACCTGCGGGACAGGTTTTGGC
TGGTGATTAAGGAAGATGGACACATGGTCACTGCCCGACAGGAGCCTCGCCTCGTGCTCATCTCCATCAT
TTATGAGAATAACTGCCTGATCTTCAGGGCTCCAGACATGGACCAGCTGGTTTTGCCTAGCAAGCAGCCT
TCCTCAAACAAACTCCACAACTGCAGGATATTTGGCCTTGACATTAAAGGCAGAGACTGTGGCAATGAGG
CAGCTAAGTGGTTCACCAACTTCTTGAAAACTGAAGCGTATAGATTGGTTCAATTTGAGACAAACATGAA
GGGAAGAACATCAAGAAAACTTCTCCCCACTCTTGATCAGAATTTCCAGGTGGCCTACCCAGACTACTGC
CCGCTCCTGATCATGACAGATGCCTCCCTGGTAGATTTGAATACCAGGATGGAGAAGAAAATGAAAATGG
AGAATTTCAGGCCAAATATTGTGGTGACCGGCTGTGATGCTTTTGAGGAGGCTTCAGCAACCAGGAGGGA
TTGA

Translation (257 aa):
MGASSSSALARLGLPARPWPRWLGVAALGLAAVALGTVAWRRAWPRRRRRLQQVGTVAKLWIYPVKSCKG
VPVSEAECTAMGLRSGNLRDRFWLVIKEDGHMVTARQEPRLVLISIIYENNCLIFRAPDMDQLVLPSKQP
SSNKLHNCRIFGLDIKGRDCGNEAAKWFTNFLKTEAYRLVQFETNMKGRTSRKLLPTLDQNFQVAYPDYC
PLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEASATRRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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