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Report for CCDS81329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81329.1 Public Homo sapiens 1 TMEM59 24 110 108 CCDS HistoryNCBI Gene:9528Re-query CCDS DB by CCDS ID:81329.1Re-query CCDS DB by GeneID:9528See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371341.5 ENSP00000360392.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371341.5Link to Ensembl Protein Viewer:ENSP00000360392.1Re-query CCDS DB by Nucleotide ID:ENST00000371341Re-query CCDS DB by Protein ID:ENSP00000360392
Original member Current member EBI ENST00000371344.5 ENSP00000360395.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371344.5Link to Ensembl Protein Viewer:ENSP00000360395.1Re-query CCDS DB by Nucleotide ID:ENST00000371344Re-query CCDS DB by Protein ID:ENSP00000360395
Original member Current member EBI ENST00000371348.5 ENSP00000360399.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371348.5Link to Ensembl Protein Viewer:ENSP00000360399.1Re-query CCDS DB by Nucleotide ID:ENST00000371348Re-query CCDS DB by Protein ID:ENSP00000360399
Original member Current member NCBI NM_001305051.1 NP_001291980.1 Accepted alive Link to Nucleotide Sequence:NM_001305051.1Link to Protein Sequence:NP_001291980.1Re-query CCDS DB by Nucleotide ID:NM_001305051Re-query CCDS DB by Protein ID:NP_001291980Link to BLAST:NP_001291980.1
Original member Current member NCBI NM_001305052.1 NP_001291981.1 Accepted alive Link to Nucleotide Sequence:NM_001305052.1Link to Protein Sequence:NP_001291981.1Re-query CCDS DB by Nucleotide ID:NM_001305052Re-query CCDS DB by Protein ID:NP_001291981Link to BLAST:NP_001291981.1

Chromosomal Locations for CCDS 81329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54032150 54032305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54036610 54036718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54040756 54040837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54041724 54041805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54043373 54043522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGTCCCTGATGCCAAAAATGCACCTACTCTTTCCTCTAACTCTGGTGAGGTCATTCTGGAGTGACATGA
TGGACTCCGCACAGAGCTTCATAACCTCTTCATGGACTTTTTATCTTCAAGCCGATGACGGAAAAATAGT
TATATTCCAGTCTAAGCCAGAAATCCAGTACGCACCACATTTGGAGCAGGAGCCTACAAATTTGAGAGAA
TCATCTCTAAGCAAAATGTCCTATCTGCAAATGAGAAATTCACAAGCGCACAGGAATTTTCTTGAAGATG
GAGAAAGTGATGGCTTTTTAAGATGCCTCTCTCTTAACTCTGGGTGGATTTTAACTACAACTCTTGTCCT
CTCGGTGATGGTATTGCTTTGGATTTGTTGTGCAACTGTTGCTACAGCTGTGGAGCAGTATGTTCCCTCT
GAGAAGCTGAGTATCTATGGTGACTTGGAGTTTATGAATGAACAAAAGCTAAACAGATATCCAGCTTCTT
CTCTTGTGGTTGTTAGATCTAAAACTGAAGATCATGAAGAAGCAGGGCCTCTACCTACAAAAGTGAATCT
TGCTCATTCTGAAATTTAA

Translation (192 aa):
MSLMPKMHLLFPLTLVRSFWSDMMDSAQSFITSSWTFYLQADDGKIVIFQSKPEIQYAPHLEQEPTNLRE
SSLSKMSYLQMRNSQAHRNFLEDGESDGFLRCLSLNSGWILTTTLVLSVMVLLWICCATVATAVEQYVPS
EKLSIYGDLEFMNEQKLNRYPASSLVVVRSKTEDHEEAGPLPTKVNLAHSEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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