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Report for CCDS8104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8104.1 Public Homo sapiens 11 ZNRD2 24 110 108 CCDS HistoryNCBI Gene:10534Re-query CCDS DB by CCDS ID:8104.1Re-query CCDS DB by GeneID:10534See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309328.8 ENSP00000312318.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309328.8Link to Ensembl Protein Viewer:ENSP00000312318.3Re-query CCDS DB by Nucleotide ID:ENST00000309328Re-query CCDS DB by Protein ID:ENSP00000312318
Original member Current member NCBI NM_006396.3 NP_006387.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006396.3Link to Protein Sequence:NP_006387.1Re-query CCDS DB by Nucleotide ID:NM_006396Re-query CCDS DB by Protein ID:NP_006387Link to BLAST:NP_006387.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006387.1 199 O60232 199 100% 0 0

Chromosomal Locations for CCDS 8104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65570492 65570510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65570604 65570755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65570886 65570970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65571391 65571734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGGCCCTGAACGGAGCTGAAGTCGACGACTTCTCCTGGGAGCCCCCGACTGAGGCGGAGACGAAGGTGC
TGCAGGCGCGACGGGAGCGGCAAGATCGCATCTCCCGGCTCATGGGCGACTATCTGCTGCGCGGTTACCG
CATGCTGGGCGAGACGTGTGCGGACTGCGGGACGATCCTCCTCCAAGACAAACAGCGGAAAATCTACTGC
GTGGCTTGTCAGGAACTCGACTCAGACGTGGATAAAGATAATCCCGCTCTGAATGCCCAGGCTGCCCTCT
CCCAAGCTCGGGAGCACCAGCTGGCCTCAGCCTCAGAGCTCCCCCTGGGCTCTCGACCTGCGCCCCAGCC
CCCAGTACCTCGTCCGGAGCACTGTGAGGGAGCTGCAGCAGGACTCAAGGCAGCCCAGGGGCCACCTGCT
CCTGCTGTGCCTCCAAATACAGATGTCATGGCCTGCACACAGACAGCCCTCTTGCAGAAGCTGACCTGGG
CCTCTGCTGAACTGGGCTCTAGCACCTCCCTGGAGACTAGCATCCAGCTGTGTGGCCTTATCCGCGCATG
TGCGGAGGCCCTGCGCAGCCTGCAGCAGCTACAGCACTAA

Translation (199 aa):
MALNGAEVDDFSWEPPTEAETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTILLQDKQRKIYC
VACQELDSDVDKDNPALNAQAALSQAREHQLASASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPA
PAVPPNTDVMACTQTALLQKLTWASAELGSSTSLETSIQLCGLIRACAEALRSLQQLQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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