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Report for CCDS8094.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8094.1 Public Homo sapiens 11 ZNHIT2 24 110 108 CCDS HistoryNCBI Gene:741Re-query CCDS DB by CCDS ID:8094.1Re-query CCDS DB by GeneID:741See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8094.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310597.6 ENSP00000308548.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310597.6Link to Ensembl Protein Viewer:ENSP00000308548.4Re-query CCDS DB by Nucleotide ID:ENST00000310597Re-query CCDS DB by Protein ID:ENSP00000308548
Original member Current member NCBI NM_014205.4 NP_055020.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014205.4Link to Protein Sequence:NP_055020.1Re-query CCDS DB by Nucleotide ID:NM_014205Re-query CCDS DB by Protein ID:NP_055020Link to BLAST:NP_055020.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055020.1 403 Q9UHR6 403 100% 0 0

Chromosomal Locations for CCDS 8094.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65116442 65117653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGGAGCCGGCCGGGCCCTGTGGCTTCTGCCCGGCGGGGGAGGTCCAGCCAGCGCGTTACACCTGCCCTC
GCTGTAATGCGCCCTACTGCTCGCTGCGCTGCTACCGGACGCATGGCACCTGCGCAGAAAACTTCTACCG
TGACCAGGTGCTGGGAGAGCTCCGCGGTTGCAGCGCTCCTCCCAGCCGCCTAGCAAGCGCCCTACGCCGG
CTGCGTCAGCAACGCGAGACCGAGGACGAGCCTGGGGAAGCAGGCCTCAGCTCCGGCCCGGCGCCCGGCG
GCCTATCGGGACTCTGGGAGCGGCTGGCGCCGGGCGAAAAAGCTGCCTTCGAGCGGCTGCTGAGCCGCGG
TGAGGCCGGGCGGCTGCTGCCTCCATGGCGGCCGTGGTGGTGGAACCGCGGAGCCGGACCGCAGCTTCTG
GAGGAGCTGGATAATGCCCCGGGTAGTGACGCCGCGGAGCTGGAGCTCGCCCCTGCGAGGACCCCGCCGG
ATTCTGTGAAAGATGCCTCCGCCGCGGAGCCCGCGGCCGCCGAGCGGGTTCTTGGAGATGTCCCGGGGGC
CTGCACGCCCGTCGTACCCACCCGCATCCCCGCGATAGTCAGCCTGAGCCGCGGCCCAGTCTCGCCGCTC
GTGCGCTTCCAGCTGCCCAATGTGCTGTTCGCCTACGCGCATACTCTCGCCCTGTATCACGGCGGTGACG
ACGCGCTGCTCTCTGACTTCTGTGCCACACTGCTCGGCGTTTCCGGAGCCCTGGGTGCCCAGCAAGTCTT
CGCCTCTGCGGAAGAAGCCCTGCAGGCGGCAGCCCACGTGCTGGAAGCAGGCGAGCACCCGCCGGGGCCC
CTGGGCACACGAGGGGCTATGCACGAGGTCGCCCGCATCCTGCTGGGCGAGGGCCCGACCAACCAGAAAG
GCTACACGCTGGCAGCACTGGGGGACCTGGCACAGACCCTGGGCCGTGCCCGGAAACAGGCCGTGGCTAG
AGAAGAGCGAGATCATCTTTACCGGGCCCGGAAAAAGTGCCAGTTCCTCCTGGCCTGGACCAACGAAAAT
GAGGCGGCCCTCACACCCCTGGCCCTAGACTGCGCCAGGGCTCACCAAGCCCATGCTGTGGTAGCCGAGG
AGGTGGCCGCCCTCACTGGGGAGCTGGAGCGGCTTTGGGGAGGCCCCGTGCCACCTGCCCCAAGAACTCT
CATTGAGGAGCTCCCTAGCTGA

Translation (403 aa):
MEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGTCAENFYRDQVLGELRGCSAPPSRLASALRR
LRQQRETEDEPGEAGLSSGPAPGGLSGLWERLAPGEKAAFERLLSRGEAGRLLPPWRPWWWNRGAGPQLL
EELDNAPGSDAAELELAPARTPPDSVKDASAAEPAAAERVLGDVPGACTPVVPTRIPAIVSLSRGPVSPL
VRFQLPNVLFAYAHTLALYHGGDDALLSDFCATLLGVSGALGAQQVFASAEEALQAAAHVLEAGEHPPGP
LGTRGAMHEVARILLGEGPTNQKGYTLAALGDLAQTLGRARKQAVAREERDHLYRARKKCQFLLAWTNEN
EAALTPLALDCARAHQAHAVVAEEVAALTGELERLWGGPVPPAPRTLIEELPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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