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Report for CCDS80834.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80834.1 Public Mus musculus 7 Krtap5-1 23 108 98 CCDS HistoryNCBI Gene:50774Re-query CCDS DB by CCDS ID:80834.1Re-query CCDS DB by GeneID:50774See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80834.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000188274.1 ENSMUSP00000139752.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000188274.1Link to Ensembl Protein Viewer:ENSMUSP00000139752.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000188274Re-query CCDS DB by Protein ID:ENSMUSP00000139752
Original member Current member NCBI NM_015808.2 NP_056623.1 Accepted alive Link to Nucleotide Sequence:NM_015808.2Link to Protein Sequence:NP_056623.1Re-query CCDS DB by Nucleotide ID:NM_015808Re-query CCDS DB by Protein ID:NP_056623Link to BLAST:NP_056623.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056623.1 230 Q64507-1 230 100% 0 0

Chromosomal Locations for CCDS 80834.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142296377 142297069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGACCTGCTGTGGCTGTTCAGGAGGCTGTGGCTCCAGCTGTGGGGGCTGTGGCTCCAGCTGTGGGGGCT
GTGGCTCTGGCTGTGGGGGATGTGGCTCAAATTGTGGGGGCTGTGGCTCCAGCTGCTGCAAGCCTGTGTG
TTGCTGTAAGCCTGTGTGCTGTTGTGTTCCTGTCTGTTCCTGCTCCAGCTGTGGAGGCTGTGGCTCCAGC
TGTGGTGGATGTGGCAGCTGTGGCTCCAGCTGTGGGGGCTGTGGCTCCAGCTGTTGCAAGCCTGTGTGCT
GCTGTGTGCCTGTCTGTTCCTGCTCCAGCTGTGGAGGCTGCAAGCCCTGCTGCTGCCAGTCCAGCTGCTG
CAAACCCTGCTGCTCTTCAGGCTGTGGGTCTTCCTGCTGTCAGTCCAGCTGCTGCAAGCCCTGCTGCTGT
CAGTCCAGCTGCTGCAAGCCCTGCTGCTGTCAGTCCAGCTGCTGCAAGCCCTGTTGCTCTTCAGGCTGTG
GGTCTTCCTGCTGTCAGTCCAGCTGCTGTAAGCCCTGCTGCTGTCAGTCTAGCTGCTGCAAGCCCTGCTG
TTGTCAGTCTAGCTGCTGCAAGCCCTGCTGCTGTCAGTCTAGCTGCTGCAAGCCCTGCTGCTGTCAGTCC
AGCTGCTGCAAGCCCTGCTGTTCATCAGGCTGCGGGTCTTCCTGCTGTCAGGACAGCTGCTGA

Translation (230 aa):
MTCCGCSGGCGSSCGGCGSSCGGCGSGCGGCGSNCGGCGSSCCKPVCCCKPVCCCVPVCSCSSCGGCGSS
CGGCGSCGSSCGGCGSSCCKPVCCCVPVCSCSSCGGCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCC
QSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQS
SCCKPCCSSGCGSSCCQDSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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