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Report for CCDS80832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80832.1 Public Mus musculus 7 Krtap5-2 23 108 98 CCDS HistoryNCBI Gene:71623Re-query CCDS DB by CCDS ID:80832.1Re-query CCDS DB by GeneID:71623See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80832.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000190456.1 ENSMUSP00000140784.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190456.1Link to Ensembl Protein Viewer:ENSMUSP00000140784.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190456Re-query CCDS DB by Protein ID:ENSMUSP00000140784
Original member Current member NCBI NM_027844.4 NP_082120.3 Accepted alive Link to Nucleotide Sequence:NM_027844.4Link to Protein Sequence:NP_082120.3Re-query CCDS DB by Nucleotide ID:NM_027844Re-query CCDS DB by Protein ID:NP_082120Link to BLAST:NP_082120.3

Chromosomal Locations for CCDS 80832.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142174838 142175941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1104 nt):
ATGAGCTGCTGTGGCTGTTCAGGAGGCTGTGGCTCCAGCTGTGGGGGCTGTGGCTCCAGCTGTTGCAAGC
CTGTGTGCTGCTGCAAGCCTGTGTGCTGCTGTGTGCCAGCCTGTTCCTGCTCCAGCTGTGGGGACTGCAA
GGGAGGCTGTGGCTCCTGTGGGGGCTGCAAGGGAGGCTGTGGCTCCTGTGGTGGCTGCAAGGGAGGCTGT
GGCTCCTGTGGAGGCTGCAAGGGAGGCTGTGGCTCCTGTGGAGGCTGTGGCTCCTGTGGGGGCTGCAAGG
GAGGCTGTAGTTCCTGTGGAGGCTGTGGCTCCTGTGGAGGCTGCAAGGGAGGCTGTGGCTCCTGTGGAGG
CTGTGGCTCCTGTGGAGGCTGCAAGGGAGGCTGTGGTTCCTGTGGGGGCTGCAAGGGAGGCTGTGGTTCC
TGTGGTGGCTGCAAGGGAGGCTGTGGCTCCTGTGGAGGCTGTGGCTCCTGTGGAGGCTGCAAGGGAGGCT
GTGGTTCCTGTGGGGGCTGCAAGGGAGGCTGTGGCTCCTGTGGAGGCTGTGGCTCCTGTGGAGGCTGCAA
GGGAGGCTGTGGCTCCTGTGGAGGCTGCAAGGGTGGATGTAGTTCTTGTGGGGGCTGTGGTTCTTGTGGG
GGCTGCAAGGGAGGCTGTAGTTCCTGTGGGGGCTGTGGCTCCTGTGGGGGTTGCAAGGGAGGCTGTGGCT
CCTGTGGGGGCTGTGGTTCCTGTGGTGGGTGCAAGGGAAGCTGTGGCTCCTGTGGAGGCTGCAAGGGTGG
TTGTAGTTCCTGTGGGGGCTGTGGTTCCTGTGGGGGCTGCAAGGGAGGCTGTAGTTCCTGTGGAGGCTGT
GGCTCCTGTGGGGGCTGCAAGGGAGGCTGTGGCTCTTGTGGAGGCTGTGGCTCCTGTGGGGGCTGTGGCT
CCTGTGGTTGCTGCCAGTCCAGCTGCTGCAAGCCCTGTTGTTGCCAATCCAGCTGTTGCAAGCCCTGCTG
CTGCCAATCCAGCTGCTGCCAGTCCAGCTGCTGCAAGCCCTGCTGCTGCCAGTCCAGCTGTTGCAAGCCC
TGCTGCTGTCAGTCCAGCTGCTGTGCTCCTGTATGCTGCCAGTGTAAGATCTGA

Translation (367 aa):
MSCCGCSGGCGSSCGGCGSSCCKPVCCCKPVCCCVPACSCSSCGDCKGGCGSCGGCKGGCGSCGGCKGGC
GSCGGCKGGCGSCGGCGSCGGCKGGCSSCGGCGSCGGCKGGCGSCGGCGSCGGCKGGCGSCGGCKGGCGS
CGGCKGGCGSCGGCGSCGGCKGGCGSCGGCKGGCGSCGGCGSCGGCKGGCGSCGGCKGGCSSCGGCGSCG
GCKGGCSSCGGCGSCGGCKGGCGSCGGCGSCGGCKGSCGSCGGCKGGCSSCGGCGSCGGCKGGCSSCGGC
GSCGGCKGGCGSCGGCGSCGGCGSCGCCQSSCCKPCCCQSSCCKPCCCQSSCCQSSCCKPCCCQSSCCKP
CCCQSSCCAPVCCQCKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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