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Report for CCDS79416.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79416.1 Public Mus musculus 15 Zfp740 23 108 98 CCDS HistoryNCBI Gene:68744Re-query CCDS DB by CCDS ID:79416.1Re-query CCDS DB by GeneID:68744See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79416.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118729.7 ENSMUSP00000112985.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118729.7Link to Ensembl Protein Viewer:ENSMUSP00000112985.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118729Re-query CCDS DB by Protein ID:ENSMUSP00000112985
Original member Current member NCBI NM_001289691.1 NP_001276620.1 Accepted alive Link to Nucleotide Sequence:NM_001289691.1Link to Protein Sequence:NP_001276620.1Re-query CCDS DB by Nucleotide ID:NM_001289691Re-query CCDS DB by Protein ID:NP_001276620Link to BLAST:NP_001276620.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276620.1 168 Q6NZQ6-2 168 100% 0 0

Chromosomal Locations for CCDS 79416.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 102207837 102207920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102208272 102208361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102208753 102208876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102209155 102209273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 102212596 102212685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGA
GGTGCTCCAGTCAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGAGGATGACAGCTTGGC
TGAGGCCTCTCATTCAAAAAAGACTGTTAAAAAGGTGGTGGTAGTGGAACAAAATGGCTCTTTTCAAGTA
AAGATTCCCAAAAATTTTATTTGTGAACACTGCTTTGGAGCCTTTCGGAGCAGTTACCACCTCAAGAGGC
ACGTCCTAATCCACACTGGTGAGAAACCATTTGAGTGTGATGTCTGTGATATGCGTTTCATCCAGAAGTA
CCATCTCGAACGCCACAAGCGGGTACACAGTGGCGAAAAGCCTTACCAGTGTGAACGATGTCATCAGTGT
TTTTCTCGGACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGAAG
GGCAGTTTTCTCTATAG

Translation (168 aa):
MMLSQIASKQAENGERAGSPDVLRCSSQGHRKDSDKSRNRKEDDSLAEASHSKKTVKKVVVVEQNGSFQV
KIPKNFICEHCFGAFRSSYHLKRHVLIHTGEKPFECDVCDMRFIQKYHLERHKRVHSGEKPYQCERCHQC
FSRTDRLLRHKRMCQGCQSKTSEGQFSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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