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Report for CCDS79331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79331.1 Public Mus musculus 14 Gata4 23 108 98 CCDS HistoryNCBI Gene:14463Re-query CCDS DB by CCDS ID:79331.1Re-query CCDS DB by GeneID:14463See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79331.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067417.9 ENSMUSP00000066927.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067417.9Link to Ensembl Protein Viewer:ENSMUSP00000066927.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000067417Re-query CCDS DB by Protein ID:ENSMUSP00000066927
Original member Current member NCBI NM_001310610.1 NP_001297539.1 Accepted alive Link to Nucleotide Sequence:NM_001310610.1Link to Protein Sequence:NP_001297539.1Re-query CCDS DB by Nucleotide ID:NM_001310610Re-query CCDS DB by Protein ID:NP_001297539Link to BLAST:NP_001297539.1

Chromosomal Locations for CCDS 79331.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 63200375 63200551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63201478 63201632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63203311 63203398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63203659 63203784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63204589 63204758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 63240536 63241148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGTACCAAAGCCTGGCCATGGCCGCCAACCACGGCCCCCCGCCCGGCGCCTACGAAGCAGGTGGCCCTG
GCGCCTTCATGCACAGCGCGGGCGCCGCGTCCTCGCCCGTCTACGTGCCCACTCCGCGGGTGCCGTCCTC
TGTGCTGGGCCTGTCCTACCTGCAGGGCGGTGGCAGTGCCGCTGCAGCTGGAACCACCTCGGGTGGCAGC
TCCGGGGCCGGCCCGTCGGGTGCAGGGCCTGGGACCCAGCAGGGTAGCCCTGGCTGGAGCCAAGCTGGAG
CCGAGGGAGCCGCCTACACCCCGCCGCCCGTGTCCCCGCGCTTCTCTTTCCCGGGGACTACTGGGTCCCT
GGCGGCCGCTGCCGCCGCTGCCGCAGCCCGGGAAGCTGCAGCCTACGGCAGTGGCGGCGGGGCGGCGGGC
GCTGGTCTGGCTGGCCGAGAGCAGTACGGGCGTCCGGGCTTCGCCGGCTCCTACTCCAGCCCCTACCCAG
CCTACATGGCCGACGTGGGAGCATCCTGGGCCGCAGCCGCTGCCGCCTCTGCCGGCCCCTTCGACAGCCC
AGTCCTGCACAGCCTGCCTGGACGGGCCAACCCTGGAAGACACCCCAATCTCGTAGATATGTTTGATGAC
TTCTCAGAAGGCAGAGAGTGTGTCAATTGTGGGGCCATGTCCACCCCACTCTGGAGGCGAGATGGGACGG
GACACTACCTGTGCAATGCCTGTGGCCTCTATCACAAGATGAACGGCATCAACCGGCCCCTCATTAAGCC
TCAGCGCCGCCTGTCCGCTTCCCGCCGGGTAGGCCTCTCCTGTGCCAACTGCCAGACTACCACCACCACG
CTGTGGCGTCGTAATGCCGAGGGTGAGCCTGTATGTAATGCCTGCGGCCTCTACATGAAGCTCCATGGGG
TTCCCAGGCCTCTTGCAATGCGGAAGGAGGGGATTCAAACCAGAAAACGGAAGCCCAAGAACCTGAATAA
ATCTAAGACGCCAGCAGGTCCTGCTGGTGAGACCCTCCCTCCCTCCAGTGGTGCCTCCAGCGGTAACTCC
AGCAATGCCACTAGCAGCAGCAGCAGCAGTGAAGAGATGCGCCCCATCAAGACAGAGCCCGGGCTGTCAT
CTCACTATGGGCACAGCAGCTCCATGTCCCAGACATTCAGTACTGTGTCCGGCCACGGGCCCTCCATCCA
TCCAGTGCTGTCTGCTCTGAAGCTGTCCCCACAAGGCTATGCATCTCCTGTCACTCAGACATCGCAGGCC
AGCTCCAAGCAGGACTCTTGGAACAGCCTGGTCCTGGCTGACAGTCATGGGGACATAATCACCGCGTAA

Translation (442 aa):
MYQSLAMAANHGPPPGAYEAGGPGAFMHSAGAASSPVYVPTPRVPSSVLGLSYLQGGGSAAAAGTTSGGS
SGAGPSGAGPGTQQGSPGWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYGSGGGAAG
AGLAGREQYGRPGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPGRHPNLVDMFDD
FSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTT
LWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAGPAGETLPPSSGASSGNS
SNATSSSSSSEEMRPIKTEPGLSSHYGHSSSMSQTFSTVSGHGPSIHPVLSALKLSPQGYASPVTQTSQA
SSKQDSWNSLVLADSHGDIITA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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