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Report for CCDS793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
793.1 Public Homo sapiens 1 CLCC1 24 110 108 CCDS HistoryNCBI Gene:23155Re-query CCDS DB by CCDS ID:793.1Re-query CCDS DB by GeneID:23155See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369970.8 ENSP00000358987.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369970.8Link to Ensembl Protein Viewer:ENSP00000358987.3Re-query CCDS DB by Nucleotide ID:ENST00000369970Re-query CCDS DB by Protein ID:ENSP00000358987
Original member Current member EBI ENST00000686434.1 ENSP00000508570.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686434.1Link to Ensembl Protein Viewer:ENSP00000508570.1Re-query CCDS DB by Nucleotide ID:ENST00000686434Re-query CCDS DB by Protein ID:ENSP00000508570
Original member Current member EBI ENST00000685628.1 ENSP00000509075.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685628.1Link to Ensembl Protein Viewer:ENSP00000509075.1Re-query CCDS DB by Nucleotide ID:ENST00000685628Re-query CCDS DB by Protein ID:ENSP00000509075
Original member Current member EBI ENST00000687226.1 ENSP00000509162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687226.1Link to Ensembl Protein Viewer:ENSP00000509162.1Re-query CCDS DB by Nucleotide ID:ENST00000687226Re-query CCDS DB by Protein ID:ENSP00000509162
Original member Current member EBI ENST00000687734.1 ENSP00000510543.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687734.1Link to Ensembl Protein Viewer:ENSP00000510543.1Re-query CCDS DB by Nucleotide ID:ENST00000687734Re-query CCDS DB by Protein ID:ENSP00000510543
Original member Current member NCBI NM_015127.5 NP_055942.1 Accepted alive Link to Nucleotide Sequence:NM_015127.5Link to Protein Sequence:NP_055942.1Re-query CCDS DB by Nucleotide ID:NM_015127Re-query CCDS DB by Protein ID:NP_055942Link to BLAST:NP_055942.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055942.1 501 Q96S66-2 501 100% 0 0

Chromosomal Locations for CCDS 793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108934670 108934942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108937077 108937418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108939636 108939782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108940045 108940142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108941405 108941498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943475 108943615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108943836 108943907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108947611 108947718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108949820 108949921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108950309 108950437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGCTGTGTTCTTTGCTCCTTTGTGAATGTCTGTTGCTGGTAGCTGGTTATGCTCATGATGATGACTGGA
TTGACCCCACAGACATGCTTAACTATGATGCTGCTTCAGGAACAATGAGAAAATCTCAGGCAAAATATGG
TATTTCAGGGGAAAAGGATGTCAGTCCTGACTTGTCATGTGCTGATGAAATATCAGAATGTTATCACAAA
CTTGATTCTTTAACTTATAAGATTGATGAGTGTGAAAAGAAAAAGAGGGAAGACTATGAAAGTCAAAGCA
ATCCTGTTTTTAGGAGATACTTAAATAAGATTTTAATTGAAGCTGGAAAGCTTGGACTTTTTCATGATTT
TGAAACATGGAAGTGGCGATTCGAAGATTCCTTTGGAGTGGATCCATATAATGTGTTAATGGTACTTCTT
TGTCTGCTCTGCATCGTGGTTTTAGTGGCTACTGAGCTGTGGACATATGTACGTTGGTACACTCAGTTGA
GACGTGTTTTAATCATCAGCTTTCTGTTCAGTTTGGGATGGAATTGGATGTATTTATATAAGCTAGCTTT
TGCACAGCATCAGGCTGAAGTCGCCAAGATGGAGCCATTAAACAATGTGTGTGCCAAAAAGATGGACTGG
ACTGGAAGTATCTGGGAATGGTTTAGAAGTTCATGGACCTATAAGGATGACCCATGCCAAAAATACTATG
AGCTCTTACTAGTCAACCCTATTTGGTTGGTCCCACCAACAAAGGCACTTGCAGTTACATTCACCACATT
TGTAACGGAGCCATTGAAGCATATTGGAAAAGGAACTGGGGAATTTATTAAAGCACTCATGAAGGAAATT
CCAGCGCTGCTTCATCTTCCAGTGCTGATAATTATGGCATTAGCCATCCTGAGTTTCTGCTATGGTGCTG
GAAAATCAGTTCATGTGCTGAGACATATAGGCGGTCCTGAGAGCGAACCTCCCCAGGCACTTCGGCCACG
GGATAGAAGACGGCAGGAGGAAATTGATTATAGACCTGATGGTGGAGCAGGTGATGCCGATTTCCATTAT
AGGGGCCAAATGGGCCCCACTGAGCAAGGCCCTTATGCCAAAACGTATGAGGGTAGAAGAGAGATTTTGA
GAGAGAGAGATGTTGACTTGAGATTTCAGACTGGCAACAAGAGCCCTGAAGTGCTCCGGGCATTTGATGT
ACCAGACGCAGAGGCACGAGAGCATCCCACGGTGGTACCCAGTCATAAATCACCTGTTTTGGATACAAAG
CCCAAGGAGACAGGTGGAATCCTGGGGGAAGGCACACCGAAAGAAAGCAGTACTGAAAGCAGCCAGTCGG
CCAAGCCTGTCTCTGGCCAAGACACATCAGGGAATACAGAAGGTTCACCCGCAGCGGAAAAGGCCCAGCT
CAAGTCTGAAGCCGCAGGCAGCCCAGACCAAGGCAGCACATACAGCCCCGCAAGAGGTGTGGCTGGACCA
CGTGGACAGGATCCGGTCAGCAGCCCCTGTGGCTAG

Translation (501 aa):
MLCSLLLCECLLLVAGYAHDDDWIDPTDMLNYDAASGTMRKSQAKYGISGEKDVSPDLSCADEISECYHK
LDSLTYKIDECEKKKREDYESQSNPVFRRYLNKILIEAGKLGLFHDFETWKWRFEDSFGVDPYNVLMVLL
CLLCIVVLVATELWTYVRWYTQLRRVLIISFLFSLGWNWMYLYKLAFAQHQAEVAKMEPLNNVCAKKMDW
TGSIWEWFRSSWTYKDDPCQKYYELLLVNPIWLVPPTKALAVTFTTFVTEPLKHIGKGTGEFIKALMKEI
PALLHLPVLIIMALAILSFCYGAGKSVHVLRHIGGPESEPPQALRPRDRRRQEEIDYRPDGGAGDADFHY
RGQMGPTEQGPYAKTYEGRREILRERDVDLRFQTGNKSPEVLRAFDVPDAEAREHPTVVPSHKSPVLDTK
PKETGGILGEGTPKESSTESSQSAKPVSGQDTSGNTEGSPAAEKAQLKSEAAGSPDQGSTYSPARGVAGP
RGQDPVSSPCG


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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