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Report for CCDS79063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79063.1 Public Mus musculus 11 Tlk2 23 108 98 CCDS HistoryNCBI Gene:24086Re-query CCDS DB by CCDS ID:79063.1Re-query CCDS DB by GeneID:24086See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000145048.7 ENSMUSP00000118520.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000145048.7Link to Ensembl Protein Viewer:ENSMUSP00000118520.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000145048Re-query CCDS DB by Protein ID:ENSMUSP00000118520
Original member Current member NCBI NM_001294330.1 NP_001281259.1 Accepted alive Link to Nucleotide Sequence:NM_001294330.1Link to Protein Sequence:NP_001281259.1Re-query CCDS DB by Nucleotide ID:NM_001294330Re-query CCDS DB by Protein ID:NP_001281259Link to BLAST:NP_001281259.1

Chromosomal Locations for CCDS 79063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 105184214 105184294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105207380 105207451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105208852 105208921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105209794 105209837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105221186 105221353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105241569 105241661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105246774 105246884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105247459 105247595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105249485 105249637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105253291 105253357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105254966 105255063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105256870 105256951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105260261 105260352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105267153 105267242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105269626 105269795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105271099 105271237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105275837 105276071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGATGGAAGAACTGCATAGCCTGGACCCACGAAGGCAGGAATTACTAGAGGCCAGGTTCACTGGAGTTG
GTGTAAGTAAGGGGCCACTCAACAGTGAGTCTTCCAACCAGAGTCTGTGCAGCGTGGGGTCGTTGAGTGA
TAAAGAAGTAGAGACTCCTGAGAAAAAGCAGAATGACCAGCGAAATCGGAAAAGGAAAGCCGAGCCATAT
GACACTAGCCAAGGGAAAGGCACTCCTAGGGGACATAAAATTAGTGATTACTTTGAGCGTCGAGCAGAAC
AGCCTCTGTATGGTTTAGATGGCAGTGCAGCAAAGGAGGCCTCAGAAGAGCAGTCTGCTCTGCCCACCCT
CATGTCAGTGATGTTAGCAAAACCGCGACTTGACACAGAGCAGTTAGCGCCACGGGGAGCTGGCCTCTGC
TTCACTTTCGTCTCTTCTGACCTCACAATAGAAAAAATATCTGCACTAGAAAACAGTAAGAACTCTGACT
TAGAGAAGAAGGAAGGAAGAATAGATGATTTATTAAGAGCCAACTGTGATTTGAGACGACAGATAGATGA
ACAGCAAAAGATGCTAGAGAAATACAAGGAACGATTAAATAGATGTGTCACCATGAGCAAGAAGCTCCTT
ATAGAAAAGTCAAAACAAGAGAAGATGGCGTGCAGAGATAAGAGCATGCAGGACCGATTGCGATTAGGCC
ACTTTACTACTGTCCGGCATGGAGCCTCGTTTACTGAGCAGTGGACAGATGGTTATGCTTTCCAAAACCT
CATCAAGCAACAGGAAAGGATAAATTCACAGAGAGAAGAGATAGAAAGGCAACGGAAAATGTTAGCAAAA
CGGAAACCTCCTGCCATGGGTCAGGCCCCTCCTGCAACCAATGAGCAGAAACAACGGAAAAGCAAGACTA
ATGGAGCTGAAAATGAAACGTTAACGTTAGCCGAGTACCATGAACAAGAGGAAATCTTCAAACTTAGATT
AGGTCATCTTAAGAAAGAGGAAGCAGAAATCCAGGCAGAGCTGGAAAGGCTGGAAAGGGTTAGGAATCTA
CACATCAGGGAATTAAAAAGGATACATAATGAAGACAATTCGCAGTTTAAAGACCATCCAACACTAAATG
ACAGATATTTGTTGTTACATCTTTTGGGTAGAGGAGGTTTCAGTGAAGTTTACAAGGCATTTGATCTAAC
GGAGCAAAGATATGTAGCTGTGAAAATTCACCAGTTAAATAAAAACTGGAGAGATGAGAAAAAGGAGAAT
TACCACAAGCATGCGTGTAGGGAATACCGGATTCACAAGGAGCTGGACCACCCCAGGATAGTGAAGCTGT
ATGATTACTTTTCACTGGACACTGACTCGTTTTGTACAGTATTAGAATACTGTGAAGGGAATGACCTGGA
CTTCTACCTAAAACAGCACAAATTAATGTCGGAGAAAGAAGCCCGATCCATTATTATGCAGATTGTGAAT
GCTTTAAAGTACTTAAATGAAATAAAACCTCCCATCATACACTATGACCTCAAACCAGGTAATATCCTTT
TAGTAAATGGTACAGCATGTGGAGAGATAAAAATTACAGATTTTGGTCTTTCCAAGATCATGGATGATGA
TAGCTACAATTCAGTGGATGGCATGGAGCTGACGTCACAAGGAGCTGGTACTTATTGGTATTTACCACCA
GAGTGTTTTGTGGTTGGGAAAGAGCCACCAAAGATCTCAAATAAAGTCGATGTTTGGTCAGTGGGTGTGA
TCTTCTACCAGTGTCTTTATGGGAGGAAGGTGAGGAAGAAGGCAGTGGAGCAGCCTGGGGCCATACCCAC
CACCTCACTGGGATTCTTCTTTGCAGTTAATCATTGGAATCCTGAAAGTAGTGGTTTAAAGAAAATACAG
ACTTCTCAGTAA

Translation (633 aa):
MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPY
DTSQGKGTPRGHKISDYFERRAEQPLYGLDGSAAKEASEEQSALPTLMSVMLAKPRLDTEQLAPRGAGLC
FTFVSSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLL
IEKSKQEKMACRDKSMQDRLRLGHFTTVRHGASFTEQWTDGYAFQNLIKQQERINSQREEIERQRKMLAK
RKPPAMGQAPPATNEQKQRKSKTNGAENETLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNL
HIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKEN
YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVN
ALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPP
ECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKVRKKAVEQPGAIPTTSLGFFFAVNHWNPESSGLKKIQ
TSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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