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Report for CCDS782.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
782.1 Public Homo sapiens 1 AMY2B 24 110 108 CCDS HistoryNCBI Gene:280Re-query CCDS DB by CCDS ID:782.1Re-query CCDS DB by GeneID:280See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 782.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361355.8 ENSP00000354610.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361355.8Link to Ensembl Protein Viewer:ENSP00000354610.4Re-query CCDS DB by Nucleotide ID:ENST00000361355Re-query CCDS DB by Protein ID:ENSP00000354610
Original member Current member EBI ENST00000610648.1 ENSP00000481588.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610648.1Link to Ensembl Protein Viewer:ENSP00000481588.1Re-query CCDS DB by Nucleotide ID:ENST00000610648Re-query CCDS DB by Protein ID:ENSP00000481588
Original member Current member EBI ENST00000684275.1 ENSP00000507176.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684275.1Link to Ensembl Protein Viewer:ENSP00000507176.1Re-query CCDS DB by Nucleotide ID:ENST00000684275Re-query CCDS DB by Protein ID:ENSP00000507176
Original member Current member NCBI NM_001386109.1 NP_001373038.1 Accepted alive Link to Nucleotide Sequence:NM_001386109.1Link to Protein Sequence:NP_001373038.1Re-query CCDS DB by Nucleotide ID:NM_001386109Re-query CCDS DB by Protein ID:NP_001373038Link to BLAST:NP_001373038.1
Original member Current member NCBI NM_001387437.1 NP_001374366.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387437.1Link to Protein Sequence:NP_001374366.1Re-query CCDS DB by Nucleotide ID:NM_001387437Re-query CCDS DB by Protein ID:NP_001374366Link to BLAST:NP_001374366.1
Original member Current member NCBI NM_020978.4 NP_066188.1 Accepted alive Link to Nucleotide Sequence:NM_020978.4Link to Protein Sequence:NP_066188.1Re-query CCDS DB by Nucleotide ID:NM_020978Re-query CCDS DB by Protein ID:NP_066188Link to BLAST:NP_066188.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373038.1 511 P19961-1 511 100% 0 0
NP_001374366.1 511 P19961-1 511 100% 0 0
NP_066188.1 511 P19961-1 511 100% 0 0

Chromosomal Locations for CCDS 782.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 103571603 103571770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103572110 103572256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103573063 103573260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103573708 103573938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103574260 103574393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103575223 103575345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103575441 103575540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103577490 103577608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103577720 103577845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 103579311 103579500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGAAGTTCTTTCTGTTGCTTTTCACCATTGGGTTCTGCTGGGCTCAGTATTCCCCAAATACACAACAAG
GACGGACATCTATTGTTCATCTGTTTGAATGGCGATGGGTTGATATTGCTCTTGAATGTGAGCGATATTT
AGCTCCCAAGGGATTTGGAGGGGTTCAGGTCTCTCCACCAAATGAAAATGTTGCAATTCACAACCCTTTC
AGACCTTGGTGGGAAAGATACCAACCAGTTAGCTATAAATTATGCACAAGATCTGGAAATGAAGATGAAT
TTAGAAACATGGTGACTAGATGTAACAATGTTGGGGTTCGTATTTATGTGGATGCTGTAATTAATCATAT
GTCTGGTAATGCTGTGAGTGCAGGAACAAGCAGTACCTGTGGAAGTTACTTCAACCCTGGAAGTAGGGAC
TTTCCAGCAGTCCCATATTCTGGATGGGATTTTAATGATGGTAAATGTAAAACTGGAAGTGGAGATATCG
AGAACTACAATGATGCTACTCAGGTCAGAGATTGTCGTCTGGTTGGTCTTCTTGATCTTGCACTGGAGAA
AGATTATGTGCGTTCCAAGATTGCCGAATATATGAATCATCTCATTGACATTGGTGTTGCAGGGTTCAGA
CTTGATGCTTCCAAGCACATGTGGCCTGGAGACATAAAGGCAATTTTGGACAAACTGCATAATCTAAACA
GTAACTGGTTCCCTGCAGGAAGTAAACCTTTCATTTACCAGGAGGTAATTGATCTGGGTGGTGAGCCAAT
TAAAAGCAGTGACTACTTTGGAAATGGCCGGGTGACAGAATTCAAGTATGGTGCAAAACTCGGCACAGTT
ATTCGCAAGTGGAATGGAGAGAAGATGTCTTACCTAAAGAACTGGGGAGAAGGTTGGGGTTTCATGCCTT
CTGACAGAGCACTTGTCTTTGTGGATAACCATGACAATCAACGAGGACATGGGGCTGGAGGAGCCTCTAT
TCTTACCTTCTGGGATGCTAGGCTGTATAAAATGGCAGTTGGATTTATGCTTGCTCATCCTTATGGTTTT
ACACGAGTAATGTCAAGCTACCGTTGGCCAAGACAGTTTCAAAATGGAAACGATGTTAATGATTGGGTTG
GGCCACCAAATAATAATGGAGTAATTAAAGAAGTTACTATTAATCCAGACACTACTTGTGGCAATGACTG
GGTCTGTGAACATCGATGGCGCCAAATAAGGAACATGGTTAATTTCCGCAATGTAGTGGATGGCCAGCCT
TTTACAAACTGGTATGATAATGGGAGCAACCAAGTGGCTTTTGGGAGAGGAAACAGAGGATTCATTGTTT
TCAACAATGATGACTGGACATTTTCTTTAACTTTGCAAACTGGTCTTCCTGCTGGCACATACTGTGATGT
CATTTCTGGAGATAAAATTAATGGCAATTGCACAGGCATTAAAATCTACGTTTCTGACGATGGCAAAGCT
CATTTTTCTATTAGTAACTCTGCTGAGGATCCATTTATTGCAATTCATGCTGAATCTAAATTATAA

Translation (511 aa):
MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPF
RPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMSGNAVSAGTSSTCGSYFNPGSRD
FPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLVGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFR
LDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTV
IRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDARLYKMAVGFMLAHPYGF
TRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIRNMVNFRNVVDGQP
FTNWYDNGSNQVAFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKA
HFSISNSAEDPFIAIHAESKL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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