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Report for CCDS78167.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78167.1 Public Homo sapiens 6 MTRES1 24 110 108 CCDS HistoryNCBI Gene:51250Re-query CCDS DB by CCDS ID:78167.1Re-query CCDS DB by GeneID:51250See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78167.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000625458.1 ENSP00000485698.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000625458.1Link to Ensembl Protein Viewer:ENSP00000485698.1Re-query CCDS DB by Nucleotide ID:ENST00000625458Re-query CCDS DB by Protein ID:ENSP00000485698
Original member Current member NCBI NM_001142470.3 NP_001135942.1 Accepted alive Link to Nucleotide Sequence:NM_001142470.3Link to Protein Sequence:NP_001135942.1Re-query CCDS DB by Nucleotide ID:NM_001142470Re-query CCDS DB by Protein ID:NP_001135942Link to BLAST:NP_001135942.1

Chromosomal Locations for CCDS 78167.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 107030105 107030107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 107039749 107040230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 107044260 107044332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 107051057 107051236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGATTATAAGCGCCATGGCTATGGCTAGTGTTAAATTGCTTGCCGGTGTTTTAAGAAAGCCAGATGCCT
GGATTGGACTCTGGGGTGTTCTCCGAGGGACACCTTCATCATACAAACTCTGTACTTCCTGGAATCGATA
CTTGTATTTTTCTAGTACCAAGTTACGTGCACCAAATTATAAAACACTTTTTTATAATATTTTCTCACTG
AGACTCCCAGGGCTTTTACTATCTCCAGAATGTATTTTTCCTTTTTCCGTAAGACTCAAAAGTAATATAA
GGTCTACAAAATCTACTAAAAAGTCTCTGCAAAAAGTAGATGAAGAGGACTCTGATGAAGAAAGCCATCA
TGATGAGATGAGTGAGCAGGAAGAGGAGCTTGAGGATGATCCTACTGTAGTCAAAAACTATAAAGACCTG
GAAAAAGCAGTTCAGTCTTTTCGGTATGATGTTGTCCTGAAGACGGGGCTAGATATTGGGAGAAACAAAG
TGGAAGATGCTTTCTACAAAGGTGAACTCAGGCTGAATGAGGAAAAATTATGGAAGAAAAGCAGAACGGT
GAAAGTGGGAGATACATTGGATCTTCTCATTGGAGAGGATAAAGAAGCAGGAACAGAGACAGTTATGCGG
ATTCTCTTGAAAAAAGTGTTTGAAGAGAAGACTGAAAGTGAAAAATACAGAGTGGTGTTACGGCGGTGGA
AAAGTTTAAAGTTGCCTAAGAAGAGAATGTCTAAATAA

Translation (245 aa):
MIISAMAMASVKLLAGVLRKPDAWIGLWGVLRGTPSSYKLCTSWNRYLYFSSTKLRAPNYKTLFYNIFSL
RLPGLLLSPECIFPFSVRLKSNIRSTKSTKKSLQKVDEEDSDEESHHDEMSEQEEELEDDPTVVKNYKDL
EKAVQSFRYDVVLKTGLDIGRNKVEDAFYKGELRLNEEKLWKKSRTVKVGDTLDLLIGEDKEAGTETVMR
ILLKKVFEEKTESEKYRVVLRRWKSLKLPKKRMSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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