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Report for CCDS78124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78124.1 Public Homo sapiens 6 TUBB 24 110 108 CCDS HistoryNCBI Gene:203068Re-query CCDS DB by CCDS ID:78124.1Re-query CCDS DB by GeneID:203068See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330914.7 ENSP00000365578.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000330914.7Link to Ensembl Protein Viewer:ENSP00000365578.2Re-query CCDS DB by Nucleotide ID:ENST00000330914Re-query CCDS DB by Protein ID:ENSP00000365578
Original member Current member EBI ENST00000396384.1 ENSP00000379668.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396384.1Link to Ensembl Protein Viewer:ENSP00000379668.1Re-query CCDS DB by Nucleotide ID:ENST00000396384Re-query CCDS DB by Protein ID:ENSP00000379668
Original member Current member EBI ENST00000681435.1 ENSP00000506665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000681435.1Link to Ensembl Protein Viewer:ENSP00000506665.1Re-query CCDS DB by Nucleotide ID:ENST00000681435Re-query CCDS DB by Protein ID:ENSP00000506665
Original member Current member NCBI NM_001293215.2 NP_001280144.1 Accepted alive Link to Nucleotide Sequence:NM_001293215.2Link to Protein Sequence:NP_001280144.1Re-query CCDS DB by Nucleotide ID:NM_001293215Re-query CCDS DB by Protein ID:NP_001280144Link to BLAST:NP_001280144.1
Original member Current member NCBI NM_001293216.2 NP_001280145.1 Accepted alive Link to Nucleotide Sequence:NM_001293216.2Link to Protein Sequence:NP_001280145.1Re-query CCDS DB by Nucleotide ID:NM_001293216Re-query CCDS DB by Protein ID:NP_001280145Link to BLAST:NP_001280145.1

Chromosomal Locations for CCDS 78124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30722968 30723028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30723340 30724397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGACTCTGTTCGCTCAGGTCCTTTTGGCCAGATCTTTAGACCAGACAACTTTGTATTTGGTCAGTCTG
GGGCAGGTAACAACTGGGCCAAAGGCCACTACACAGAGGGCGCCGAGCTGGTTGATTCTGTCCTGGATGT
GGTACGGAAGGAGGCAGAGAGCTGTGACTGCCTGCAGGGCTTCCAGCTGACCCACTCACTGGGCGGGGGC
ACAGGCTCTGGAATGGGCACTCTCCTTATCAGCAAGATCCGAGAAGAATACCCTGATCGCATCATGAATA
CCTTCAGTGTGGTGCCTTCACCCAAAGTGTCTGACACCGTGGTCGAGCCCTACAATGCCACCCTCTCCGT
CCATCAGTTGGTAGAGAATACTGATGAGACCTATTGCATTGACAACGAGGCCCTCTATGATATCTGCTTC
CGCACTCTGAAGCTGACCACACCAACCTACGGGGATCTGAACCACCTTGTCTCAGCCACCATGAGTGGTG
TCACCACCTGCCTCCGTTTCCCTGGCCAGCTCAATGCTGACCTCCGCAAGTTGGCAGTCAACATGGTCCC
CTTCCCACGTCTCCATTTCTTTATGCCTGGCTTTGCCCCTCTCACCAGCCGTGGAAGCCAGCAGTATCGA
GCTCTCACAGTGCCGGAACTCACCCAGCAGGTCTTCGATGCCAAGAACATGATGGCTGCCTGTGACCCCC
GCCACGGCCGATACCTCACCGTGGCTGCTGTCTTCCGTGGTCGGATGTCCATGAAGGAGGTCGATGAGCA
GATGCTTAACGTGCAGAACAAGAACAGCAGCTACTTTGTGGAATGGATCCCCAACAATGTCAAGACAGCC
GTCTGTGACATCCCACCTCGTGGCCTCAAGATGGCAGTCACCTTCATTGGCAATAGCACAGCCATCCAGG
AGCTCTTCAAGCGCATCTCGGAGCAGTTCACTGCCATGTTCCGCCGGAAGGCCTTCCTCCACTGGTACAC
AGGCGAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTCGTCTCTGAGTAT
CAGCAGTACCAGGATGCCACCGCAGAAGAGGAGGAGGATTTCGGTGAGGAGGCCGAAGAGGAGGCCTAA

Translation (372 aa):
MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGG
TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF
RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYR
ALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTA
VCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEY
QQYQDATAEEEEDFGEEAEEEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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